Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
APOA1P02647 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
APOA1P02647 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
APOA1P02647 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.56□□□□□ -1.52
APOA1P02647 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
APOA1P02647 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.56□□□□□ -1.52
APOA1P02647 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
APOA1P02647 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
APOA1P02647 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
APOA1P02647 AC023245.2-201ENST00000530760 2978 ntBASIC5.55□□□□□ -1.52
APOA1P02647 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
APOA1P02647 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
APOA1P02647 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
APOA1P02647 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA1P02647 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
APOA1P02647 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
APOA1P02647 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA1P02647 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
APOA1P02647 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
APOA1P02647 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA1P02647 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA1P02647 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
APOA1P02647 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
APOA1P02647 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
APOA1P02647 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA1P02647 NPM1P31-201ENST00000399021 764 ntBASIC5.55□□□□□ -1.52
APOA1P02647 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA1P02647 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC5.55□□□□□ -1.52
APOA1P02647 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
APOA1P02647 MRPS21P5-201ENST00000417885 231 ntBASIC5.55□□□□□ -1.52
APOA1P02647 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC5.55□□□□□ -1.52
APOA1P02647 AC073410.1-201ENST00000435125 589 ntBASIC5.55□□□□□ -1.52
APOA1P02647 RPE-210ENST00000438204 796 ntTSL 2 BASIC5.55□□□□□ -1.52
APOA1P02647 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
APOA1P02647 MTND6P5-201ENST00000448266 512 ntBASIC5.55□□□□□ -1.52
APOA1P02647 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC5.55□□□□□ -1.52
APOA1P02647 RPS27AP3-201ENST00000453803 454 ntBASIC5.55□□□□□ -1.52
APOA1P02647 RNU7-157P-201ENST00000459600 66 ntBASIC5.55□□□□□ -1.52
APOA1P02647 RN7SL815P-201ENST00000470970 290 ntBASIC5.55□□□□□ -1.52
APOA1P02647 RN7SL239P-201ENST00000490061 300 ntBASIC5.55□□□□□ -1.52
APOA1P02647 AC112184.1-201ENST00000505179 312 ntBASIC5.55□□□□□ -1.52
APOA1P02647 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC5.55□□□□□ -1.52
APOA1P02647 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.55□□□□□ -1.52
APOA1P02647 SCARNA18.2-201ENST00000516882 84 ntBASIC5.55□□□□□ -1.52
APOA1P02647 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.55□□□□□ -1.52
APOA1P02647 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC5.55□□□□□ -1.52
APOA1P02647 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.55□□□□□ -1.52
APOA1P02647 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC5.55□□□□□ -1.52
APOA1P02647 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
APOA1P02647 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.55□□□□□ -1.52
APOA1P02647 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.55□□□□□ -1.52
APOA1P02647 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
APOA1P02647 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC5.55□□□□□ -1.52
APOA1P02647 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC5.55□□□□□ -1.52
APOA1P02647 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.55□□□□□ -1.52
APOA1P02647 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC5.55□□□□□ -1.52
APOA1P02647 MIR4266-201ENST00000583300 55 ntBASIC5.55□□□□□ -1.52
APOA1P02647 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.55□□□□□ -1.52
APOA1P02647 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.55□□□□□ -1.52
APOA1P02647 AL035417.2-201ENST00000603887 796 ntBASIC5.55□□□□□ -1.52
APOA1P02647 AL139041.1-201ENST00000605480 610 ntBASIC5.55□□□□□ -1.52
APOA1P02647 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.55□□□□□ -1.52
APOA1P02647 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.55□□□□□ -1.52
APOA1P02647 AL031777.2-201ENST00000611953 196 ntBASIC5.55□□□□□ -1.52
APOA1P02647 AC106782.7-201ENST00000624024 418 ntBASIC5.55□□□□□ -1.52
APOA1P02647 AC133555.5-201ENST00000624430 418 ntBASIC5.55□□□□□ -1.52
APOA1P02647 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.55□□□□□ -1.52
APOA1P02647 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.55□□□□□ -1.52
APOA1P02647 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC5.55□□□□□ -1.52
APOA1P02647 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA1P02647 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
APOA1P02647 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA1P02647 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA1P02647 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
APOA1P02647 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA1P02647 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
APOA1P02647 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA1P02647 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
APOA1P02647 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
APOA1P02647 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.55□□□□□ -1.52
APOA1P02647 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA1P02647 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
APOA1P02647 AC091885.2-201ENST00000510391 1791 ntTSL 3 BASIC5.55□□□□□ -1.52
APOA1P02647 TCP11X1-202ENST00000622971 1372 ntBASIC5.55□□□□□ -1.52
APOA1P02647 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.54□□□□□ -1.52
APOA1P02647 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
APOA1P02647 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
APOA1P02647 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
APOA1P02647 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
APOA1P02647 AC006484.1-201ENST00000435086 1884 ntBASIC5.54□□□□□ -1.52
APOA1P02647 AL136984.1-201ENST00000607611 1893 ntBASIC5.54□□□□□ -1.52
APOA1P02647 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.54□□□□□ -1.52
APOA1P02647 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
APOA1P02647 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
APOA1P02647 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC5.54□□□□□ -1.52
APOA1P02647 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
APOA1P02647 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
APOA1P02647 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
APOA1P02647 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
APOA1P02647 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 267.5 ms