Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
UBE4BO95155 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
UBE4BO95155 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
UBE4BO95155 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.91□□□□□ -1.3
UBE4BO95155 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.91□□□□□ -1.3
UBE4BO95155 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
UBE4BO95155 AC107977.1-201ENST00000355745 939 ntBASIC6.91□□□□□ -1.3
UBE4BO95155 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
UBE4BO95155 MIR191-201ENST00000384873 92 ntBASIC6.91□□□□□ -1.3
UBE4BO95155 RN7SKP38-201ENST00000410782 309 ntBASIC6.91□□□□□ -1.3
UBE4BO95155 TMA16P2-201ENST00000413187 601 ntBASIC6.91□□□□□ -1.3
UBE4BO95155 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.91□□□□□ -1.3
UBE4BO95155 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.91□□□□□ -1.3
UBE4BO95155 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.91□□□□□ -1.3
UBE4BO95155 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.91□□□□□ -1.3
UBE4BO95155 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.91□□□□□ -1.3
UBE4BO95155 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
UBE4BO95155 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.91□□□□□ -1.3
UBE4BO95155 AC016908.1-201ENST00000442571 1219 ntBASIC6.91□□□□□ -1.3
UBE4BO95155 AC079922.1-201ENST00000443291 359 ntBASIC6.91□□□□□ -1.3
UBE4BO95155 AC234771.2-201ENST00000445718 597 ntBASIC6.91□□□□□ -1.3
UBE4BO95155 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.91□□□□□ -1.3
UBE4BO95155 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.91□□□□□ -1.3
UBE4BO95155 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.91□□□□□ -1.3
UBE4BO95155 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.91□□□□□ -1.3
UBE4BO95155 AC090115.2-201ENST00000548060 883 ntBASIC6.91□□□□□ -1.3
UBE4BO95155 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.91□□□□□ -1.3
UBE4BO95155 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.91□□□□□ -1.3
UBE4BO95155 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.91□□□□□ -1.3
UBE4BO95155 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.91□□□□□ -1.3
UBE4BO95155 MRPS21P9-201ENST00000571150 257 ntBASIC6.91□□□□□ -1.3
UBE4BO95155 WBP1LP11-201ENST00000586141 328 ntBASIC6.91□□□□□ -1.3
UBE4BO95155 AC011891.2-201ENST00000604949 397 ntBASIC6.91□□□□□ -1.3
UBE4BO95155 AL034374.2-201ENST00000605281 548 ntBASIC6.91□□□□□ -1.3
UBE4BO95155 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.91□□□□□ -1.3
UBE4BO95155 AC015819.1-201ENST00000613588 663 ntBASIC6.91□□□□□ -1.3
UBE4BO95155 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.91□□□□□ -1.3
UBE4BO95155 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
UBE4BO95155 AL353763.1-201ENST00000624467 1628 ntBASIC6.91□□□□□ -1.3
UBE4BO95155 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
UBE4BO95155 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
UBE4BO95155 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.91□□□□□ -1.3
UBE4BO95155 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
UBE4BO95155 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
UBE4BO95155 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
UBE4BO95155 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.91□□□□□ -1.3
UBE4BO95155 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.91□□□□□ -1.3
UBE4BO95155 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.91□□□□□ -1.3
UBE4BO95155 AC009831.5-201ENST00000624000 3189 ntBASIC6.91□□□□□ -1.3
UBE4BO95155 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
UBE4BO95155 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.9□□□□□ -1.3
UBE4BO95155 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
UBE4BO95155 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
UBE4BO95155 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
UBE4BO95155 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.9□□□□□ -1.3
UBE4BO95155 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
UBE4BO95155 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
UBE4BO95155 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
UBE4BO95155 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
UBE4BO95155 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
UBE4BO95155 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
UBE4BO95155 Z95114.1-201ENST00000624264 14574 ntBASIC6.9□□□□□ -1.3
UBE4BO95155 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
UBE4BO95155 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
UBE4BO95155 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
UBE4BO95155 RPL11P4-201ENST00000332269 436 ntBASIC6.9□□□□□ -1.3
UBE4BO95155 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
UBE4BO95155 LCN1P2-201ENST00000372030 223 ntBASIC6.9□□□□□ -1.3
UBE4BO95155 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
UBE4BO95155 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
UBE4BO95155 MIR621-201ENST00000384919 96 ntBASIC6.9□□□□□ -1.3
UBE4BO95155 YWHAZP4-201ENST00000392459 708 ntBASIC6.9□□□□□ -1.3
UBE4BO95155 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.9□□□□□ -1.3
UBE4BO95155 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
UBE4BO95155 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
UBE4BO95155 RNA5SP198-201ENST00000410376 127 ntBASIC6.9□□□□□ -1.3
UBE4BO95155 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.9□□□□□ -1.3
UBE4BO95155 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.9□□□□□ -1.3
UBE4BO95155 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.9□□□□□ -1.3
UBE4BO95155 LINC00328-2P-201ENST00000436585 219 ntBASIC6.9□□□□□ -1.3
UBE4BO95155 RPL12P49-201ENST00000441100 121 ntBASIC6.9□□□□□ -1.3
UBE4BO95155 CXCR2P1-202ENST00000443392 1074 ntBASIC6.9□□□□□ -1.3
UBE4BO95155 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.9□□□□□ -1.3
UBE4BO95155 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.9□□□□□ -1.3
UBE4BO95155 RPL12P7-201ENST00000493832 494 ntBASIC6.9□□□□□ -1.3
UBE4BO95155 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
UBE4BO95155 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.9□□□□□ -1.3
UBE4BO95155 OR6M2P-201ENST00000529831 871 ntBASIC6.9□□□□□ -1.3
UBE4BO95155 AP001858.2-201ENST00000536213 601 ntBASIC6.9□□□□□ -1.3
UBE4BO95155 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.9□□□□□ -1.3
UBE4BO95155 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.9□□□□□ -1.3
UBE4BO95155 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.9□□□□□ -1.3
UBE4BO95155 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.9□□□□□ -1.3
UBE4BO95155 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.9□□□□□ -1.3
UBE4BO95155 AL137246.2-201ENST00000613439 662 ntBASIC6.9□□□□□ -1.3
UBE4BO95155 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
UBE4BO95155 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
UBE4BO95155 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
UBE4BO95155 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
UBE4BO95155 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms