Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC10.69□□□□□ -0.7
CUX2O14529 AL022394.1-201ENST00000606979 292 ntBASIC10.69□□□□□ -0.7
CUX2O14529 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CUX2O14529 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC10.69□□□□□ -0.7
CUX2O14529 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CUX2O14529 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
CUX2O14529 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC10.69□□□□□ -0.7
CUX2O14529 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CUX2O14529 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC10.69□□□□□ -0.7
CUX2O14529 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC10.69□□□□□ -0.7
CUX2O14529 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CUX2O14529 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC10.69□□□□□ -0.7
CUX2O14529 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
CUX2O14529 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CUX2O14529 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CUX2O14529 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CUX2O14529 Z93929.1-201ENST00000418200 1475 ntBASIC10.68□□□□□ -0.7
CUX2O14529 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CUX2O14529 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CUX2O14529 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CUX2O14529 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC10.68□□□□□ -0.7
CUX2O14529 TRIM60P16-201ENST00000444048 694 ntBASIC10.68□□□□□ -0.7
CUX2O14529 WBP1LP3-201ENST00000523033 208 ntBASIC10.68□□□□□ -0.7
CUX2O14529 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CUX2O14529 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
CUX2O14529 AC005332.4-201ENST00000592752 579 ntBASIC10.68□□□□□ -0.7
CUX2O14529 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CUX2O14529 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CUX2O14529 MFSD8-218ENST00000641186 4448 ntBASIC10.68□□□□□ -0.7
CUX2O14529 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC10.68□□□□□ -0.7
CUX2O14529 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CUX2O14529 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC10.68□□□□□ -0.7
CUX2O14529 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CUX2O14529 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
CUX2O14529 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CUX2O14529 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CUX2O14529 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CUX2O14529 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC10.68□□□□□ -0.7
CUX2O14529 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CUX2O14529 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CUX2O14529 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CUX2O14529 CYP4F29P-201ENST00000420685 446 ntBASIC10.68□□□□□ -0.7
CUX2O14529 PSMD10P3-201ENST00000437000 448 ntBASIC10.68□□□□□ -0.7
CUX2O14529 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC10.68□□□□□ -0.7
CUX2O14529 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CUX2O14529 AC112255.1-201ENST00000624070 2493 ntBASIC10.67□□□□□ -0.7
CUX2O14529 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CUX2O14529 AC131971.1-201ENST00000332881 1482 ntBASIC10.67□□□□□ -0.7
CUX2O14529 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC10.67□□□□□ -0.7
CUX2O14529 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC10.67□□□□□ -0.7
CUX2O14529 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
CUX2O14529 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
CUX2O14529 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CUX2O14529 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
CUX2O14529 U8.4-201ENST00000363626 134 ntBASIC10.67□□□□□ -0.7
CUX2O14529 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC10.67□□□□□ -0.7
CUX2O14529 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC10.67□□□□□ -0.7
CUX2O14529 SUMO2P7-201ENST00000511179 285 ntBASIC10.67□□□□□ -0.7
CUX2O14529 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC10.67□□□□□ -0.7
CUX2O14529 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC10.67□□□□□ -0.7
CUX2O14529 AC027348.2-201ENST00000624375 642 ntBASIC10.67□□□□□ -0.7
CUX2O14529 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC10.67□□□□□ -0.7
CUX2O14529 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CUX2O14529 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
CUX2O14529 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CUX2O14529 AC007938.2-201ENST00000604666 2634 ntBASIC10.66□□□□□ -0.7
CUX2O14529 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC10.66□□□□□ -0.7
CUX2O14529 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
CUX2O14529 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CUX2O14529 AC023245.2-201ENST00000530760 2978 ntBASIC10.66□□□□□ -0.7
CUX2O14529 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC10.66□□□□□ -0.7
CUX2O14529 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CUX2O14529 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CUX2O14529 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
CUX2O14529 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
CUX2O14529 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
CUX2O14529 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC10.66□□□□□ -0.7
CUX2O14529 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
CUX2O14529 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
CUX2O14529 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
CUX2O14529 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
CUX2O14529 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CUX2O14529 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC10.66□□□□□ -0.7
CUX2O14529 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
CUX2O14529 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CUX2O14529 MIR223-201ENST00000385204 110 ntBASIC10.66□□□□□ -0.7
CUX2O14529 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
CUX2O14529 AC005042.1-201ENST00000393397 800 ntBASIC10.66□□□□□ -0.7
CUX2O14529 HMGB1P20-201ENST00000402555 677 ntBASIC10.66□□□□□ -0.7
CUX2O14529 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC10.66□□□□□ -0.7
CUX2O14529 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC10.66□□□□□ -0.7
CUX2O14529 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC10.66□□□□□ -0.7
CUX2O14529 RPL15P21-201ENST00000495592 567 ntBASIC10.66□□□□□ -0.7
CUX2O14529 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC10.66□□□□□ -0.7
CUX2O14529 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC10.66□□□□□ -0.7
CUX2O14529 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC10.66□□□□□ -0.7
CUX2O14529 MRPL57P1-201ENST00000621486 265 ntBASIC10.66□□□□□ -0.7
CUX2O14529 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC10.66□□□□□ -0.7
CUX2O14529 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC10.66□□□□□ -0.7
CUX2O14529 AC116631.1-202ENST00000640984 683 ntBASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms