Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC009283.1-201ENST00000615852 645 ntBASIC5.68□□□□□ -1.5
COPS3Q9UNS2 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 AC125336.1-201ENST00000508893 2827 ntBASIC5.67□□□□□ -1.5
COPS3Q9UNS2 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 RNA5SP478-201ENST00000364657 115 ntBASIC5.67□□□□□ -1.5
COPS3Q9UNS2 PEX12P1-201ENST00000400284 1048 ntBASIC5.67□□□□□ -1.5
COPS3Q9UNS2 RPL12P23-201ENST00000405880 490 ntBASIC5.67□□□□□ -1.5
COPS3Q9UNS2 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 RNU6-233P-201ENST00000410845 141 ntBASIC5.67□□□□□ -1.5
COPS3Q9UNS2 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 AHCYP8-201ENST00000425108 209 ntBASIC5.67□□□□□ -1.5
COPS3Q9UNS2 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.67□□□□□ -1.5
COPS3Q9UNS2 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 RBMY2BP-202ENST00000451071 1156 ntBASIC5.67□□□□□ -1.5
COPS3Q9UNS2 AL929410.2-201ENST00000451170 189 ntBASIC5.67□□□□□ -1.5
COPS3Q9UNS2 AL022319.1-201ENST00000458183 1167 ntBASIC5.67□□□□□ -1.5
COPS3Q9UNS2 SLC25A51P1-201ENST00000468432 871 ntBASIC5.67□□□□□ -1.5
COPS3Q9UNS2 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 AOX3P-204ENST00000491025 2107 ntBASIC5.67□□□□□ -1.5
COPS3Q9UNS2 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 AC131392.1-201ENST00000506490 633 ntBASIC5.67□□□□□ -1.5
COPS3Q9UNS2 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 MIR3159-201ENST00000584572 74 ntBASIC5.67□□□□□ -1.5
COPS3Q9UNS2 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 AL008723.3-201ENST00000608926 449 ntBASIC5.67□□□□□ -1.5
COPS3Q9UNS2 AC127071.2-201ENST00000623293 527 ntBASIC5.67□□□□□ -1.5
COPS3Q9UNS2 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 AC025470.1-201ENST00000510053 2032 ntBASIC5.67□□□□□ -1.5
COPS3Q9UNS2 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.67□□□□□ -1.5
COPS3Q9UNS2 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 HSPD1P1-201ENST00000503199 1726 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 SHQ1P1-201ENST00000437111 1544 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 RNA5SP382-201ENST00000363355 112 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 AC074375.1-201ENST00000372993 192 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 U3.52-201ENST00000384034 216 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 AL451061.1-201ENST00000407887 862 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 CCNJP1-201ENST00000450600 1149 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 RPS27AP3-201ENST00000453803 454 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 AC108751.3-201ENST00000461814 1020 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 RPS10P28-201ENST00000480396 498 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 KATNBL1P4-201ENST00000503545 918 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 AC137549.1-201ENST00000514243 533 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms