Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 FAM32BP-201ENST00000344033 333 ntBASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 YWHAZP6-201ENST00000399764 738 ntBASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 IFIT1P1-201ENST00000400497 1449 ntBASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 RNA5SP431-201ENST00000410312 120 ntBASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 AL139415.1-201ENST00000424862 352 ntBASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 KCTD9P1-201ENST00000430462 1167 ntBASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 AC083906.1-201ENST00000509298 406 ntBASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 AC073581.1-201ENST00000519036 575 ntBASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 AP004607.6-201ENST00000525033 1202 ntBASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 RN7SL208P-201ENST00000577964 296 ntBASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 DYNLL1P1-201ENST00000595442 269 ntBASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 AC004805.3-201ENST00000603178 310 ntBASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 AL135999.3-201ENST00000610501 812 ntBASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 AC006213.6-201ENST00000623722 4179 ntBASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
NPIPA1Q9UND3 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 PARP4P1-201ENST00000435945 2337 ntBASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 RNA5SP188-201ENST00000362916 129 ntBASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 MIR188-201ENST00000385034 86 ntBASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 AC099782.1-201ENST00000425889 474 ntBASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 AC108479.1-201ENST00000431142 427 ntBASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 RPS10P18-201ENST00000442662 495 ntBASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 POU5F1P5-201ENST00000445059 658 ntBASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 H3F3AP3-201ENST00000497682 407 ntBASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 AC018645.1-201ENST00000505003 109 ntBASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 HSD3BP3-201ENST00000514706 994 ntBASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 CYCSP25-201ENST00000525280 316 ntBASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 AC006512.2-201ENST00000543250 486 ntBASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 AC067852.5-201ENST00000589299 310 ntBASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 OR7A11P-201ENST00000597719 953 ntBASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 SMIM12P1-201ENST00000603004 274 ntBASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 AL356986.1-201ENST00000604085 341 ntBASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 CYCSP1-201ENST00000604815 315 ntBASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 AC025171.4-201ENST00000607250 1047 ntBASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 AC005899.7-201ENST00000618199 588 ntBASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
NPIPA1Q9UND3 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 458.6 ms