Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 AC005726.4-201ENST00000582858 458 ntBASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 AC022106.1-201ENST00000612834 766 ntBASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 MIR6862-1-201ENST00000613016 70 ntBASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 MIR6862-2-201ENST00000614755 70 ntBASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 AL512652.1-201ENST00000619006 500 ntBASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 EIF3EP1-201ENST00000433978 1316 ntBASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 AC027575.3-201ENST00000583058 2747 ntBASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 AC005831.1-201ENST00000624384 1697 ntBASIC8.39□□□□□ -1.07
NPC1L1Q9UHC9 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 AC107980.1-201ENST00000558671 3355 ntBASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 ATP5A1P8-201ENST00000423669 1291 ntBASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 AC023141.3-201ENST00000436698 278 ntBASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 KRTAP2-5P-201ENST00000446109 396 ntBASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 AL022319.1-201ENST00000458183 1167 ntBASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 AC018638.3-201ENST00000461273 132 ntBASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 AL035690.1-201ENST00000490892 383 ntBASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 AC090568.1-201ENST00000509499 856 ntBASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 AC006512.2-201ENST00000543250 486 ntBASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 AC020916.2-201ENST00000591242 360 ntBASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 AC079315.1-201ENST00000602952 623 ntBASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 AC141002.1-201ENST00000607025 279 ntBASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 AP001962.1-201ENST00000624114 559 ntBASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 SHQ1P1-201ENST00000437111 1544 ntBASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 CCNT2P1-201ENST00000423082 1315 ntBASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 AC016251.2-201ENST00000623393 3089 ntBASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
NPC1L1Q9UHC9 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 PSMD10P2-201ENST00000432890 672 ntBASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 OR2AF1P-201ENST00000454899 889 ntBASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 Z83838.1-202ENST00000456225 839 ntBASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 CYP4F27P-201ENST00000514557 494 ntBASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 AC021269.1-201ENST00000526860 705 ntBASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 AP004609.2-201ENST00000532177 190 ntBASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 BICD1-206ENST00000551086 423 ntTSL 3 BASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 AL845552.1-201ENST00000556820 323 ntBASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 MRPS21P8-201ENST00000569196 235 ntBASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 AP001437.1-201ENST00000608783 456 ntBASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 AC079414.3-201ENST00000612986 1090 ntBASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 FAM27E2-201ENST00000619668 403 ntBASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
NPC1L1Q9UHC9 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 FIG4-202ENST00000368941 791 ntTSL 3 BASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 GCNT1P4-201ENST00000404096 329 ntBASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 AL096711.1-201ENST00000404780 554 ntBASIC8.36□□□□□ -1.07
NPC1L1Q9UHC9 AC116036.1-201ENST00000412199 367 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms