Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LRFN1Q9P244 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LRFN1Q9P244 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LRFN1Q9P244 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LRFN1Q9P244 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LRFN1Q9P244 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LRFN1Q9P244 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LRFN1Q9P244 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LRFN1Q9P244 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LRFN1Q9P244 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LRFN1Q9P244 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 RNU1-5P-201ENST00000362684 144 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 SNORA7A-201ENST00000384765 139 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 AC245036.1-201ENST00000391727 309 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LRFN1Q9P244 AC244452.1-201ENST00000413798 141 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 AL773545.3-201ENST00000414297 706 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LRFN1Q9P244 NPM1P23-201ENST00000440193 849 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 RPS18P1-201ENST00000447840 458 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 GAPDHP16-201ENST00000448152 962 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 AC009963.4-201ENST00000448535 339 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 AL121578.2-201ENST00000448797 447 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 RPS3AP49-201ENST00000472161 790 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 AC096743.1-201ENST00000485172 319 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 OR9N1P-202ENST00000494289 481 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 HMGB1P3-201ENST00000502802 616 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 AC112206.4-201ENST00000515142 405 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 RN7SKP183-201ENST00000517169 324 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 EEF1B2P2-201ENST00000519625 676 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 AC024405.1-201ENST00000532521 1042 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 OR5BK1P-201ENST00000550421 823 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 AC111186.1-201ENST00000604684 130 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 AC005514.1-201ENST00000623521 208 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LRFN1Q9P244 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LRFN1Q9P244 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LRFN1Q9P244 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LRFN1Q9P244 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LRFN1Q9P244 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 AC010132.4-201ENST00000569883 1368 ntBASIC6.28□□□□□ -1.4
LRFN1Q9P244 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LRFN1Q9P244 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LRFN1Q9P244 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.28□□□□□ -1.4
LRFN1Q9P244 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LRFN1Q9P244 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.27□□□□□ -1.4
LRFN1Q9P244 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
LRFN1Q9P244 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
LRFN1Q9P244 AC132219.2-201ENST00000624416 2327 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LRFN1Q9P244 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 AC105749.1-201ENST00000631338 2008 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LRFN1Q9P244 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
LRFN1Q9P244 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 AC010894.1-201ENST00000313760 361 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LRFN1Q9P244 RN7SKP232-201ENST00000410170 290 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 RPS6P14-201ENST00000425165 719 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 RPS10P21-201ENST00000430654 475 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 AL590128.1-201ENST00000433407 286 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LRFN1Q9P244 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 SNRPBP1-201ENST00000443634 282 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 GAPDHP20-201ENST00000444107 1007 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 MEF2AP1-201ENST00000454867 863 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms