Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RN7SL390P-201ENST00000470634 284 ntBASIC5.59□□□□□ -1.51
SSX3Q99909 RN7SL790P-201ENST00000474043 298 ntBASIC5.59□□□□□ -1.51
SSX3Q99909 PPP1R2P6-201ENST00000478565 588 ntBASIC5.59□□□□□ -1.51
SSX3Q99909 RN7SL655P-201ENST00000486087 298 ntBASIC5.59□□□□□ -1.51
SSX3Q99909 RPS4XP23-201ENST00000487801 237 ntBASIC5.59□□□□□ -1.51
SSX3Q99909 RN7SL350P-201ENST00000492591 299 ntBASIC5.59□□□□□ -1.51
SSX3Q99909 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.59□□□□□ -1.51
SSX3Q99909 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX3Q99909 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX3Q99909 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX3Q99909 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX3Q99909 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX3Q99909 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.59□□□□□ -1.51
SSX3Q99909 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX3Q99909 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSX3Q99909 CHEK2P2-201ENST00000554701 672 ntBASIC5.59□□□□□ -1.51
SSX3Q99909 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX3Q99909 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX3Q99909 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.59□□□□□ -1.51
SSX3Q99909 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.59□□□□□ -1.51
SSX3Q99909 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC5.59□□□□□ -1.51
SSX3Q99909 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX3Q99909 AL451049.1-201ENST00000608672 497 ntBASIC5.59□□□□□ -1.51
SSX3Q99909 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC5.59□□□□□ -1.51
SSX3Q99909 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSX3Q99909 AC005858.3-201ENST00000624756 589 ntBASIC5.59□□□□□ -1.51
SSX3Q99909 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC5.59□□□□□ -1.51
SSX3Q99909 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SSX3Q99909 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SSX3Q99909 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSX3Q99909 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SSX3Q99909 AC011504.1-201ENST00000623331 4103 ntBASIC5.59□□□□□ -1.51
SSX3Q99909 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSX3Q99909 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SSX3Q99909 AC129502.1-201ENST00000623261 1654 ntBASIC5.59□□□□□ -1.52
SSX3Q99909 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
SSX3Q99909 AP005435.3-201ENST00000531260 3198 ntBASIC5.59□□□□□ -1.52
SSX3Q99909 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
SSX3Q99909 WDR95P-201ENST00000425638 1542 ntBASIC5.58□□□□□ -1.52
SSX3Q99909 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC5.58□□□□□ -1.52
SSX3Q99909 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSX3Q99909 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.58□□□□□ -1.52
SSX3Q99909 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSX3Q99909 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSX3Q99909 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSX3Q99909 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSX3Q99909 DLEU2L-201ENST00000371086 3555 ntBASIC5.58□□□□□ -1.52
SSX3Q99909 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.58□□□□□ -1.52
SSX3Q99909 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSX3Q99909 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSX3Q99909 RNU6-1331P-201ENST00000363658 106 ntBASIC5.58□□□□□ -1.52
SSX3Q99909 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.58□□□□□ -1.52
SSX3Q99909 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSX3Q99909 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SSX3Q99909 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSX3Q99909 AL079341.1-201ENST00000404701 1207 ntBASIC5.58□□□□□ -1.52
SSX3Q99909 RNA5SP251-201ENST00000410614 137 ntBASIC5.58□□□□□ -1.52
SSX3Q99909 RPL18AP14-201ENST00000417685 526 ntBASIC5.58□□□□□ -1.52
SSX3Q99909 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC5.58□□□□□ -1.52
SSX3Q99909 RPL12P43-201ENST00000420608 499 ntBASIC5.58□□□□□ -1.52
SSX3Q99909 PSMC1P2-201ENST00000423961 1204 ntBASIC5.58□□□□□ -1.52
SSX3Q99909 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.58□□□□□ -1.52
SSX3Q99909 ARAFP2-201ENST00000440565 559 ntBASIC5.58□□□□□ -1.52
SSX3Q99909 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSX3Q99909 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC5.58□□□□□ -1.52
SSX3Q99909 RN7SL379P-201ENST00000479912 293 ntBASIC5.58□□□□□ -1.52
SSX3Q99909 AC098583.1-201ENST00000480875 255 ntBASIC5.58□□□□□ -1.52
SSX3Q99909 AGGF1P3-201ENST00000493675 1213 ntBASIC5.58□□□□□ -1.52
SSX3Q99909 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.58□□□□□ -1.52
SSX3Q99909 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.58□□□□□ -1.52
SSX3Q99909 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.58□□□□□ -1.52
SSX3Q99909 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.58□□□□□ -1.52
SSX3Q99909 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SSX3Q99909 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.58□□□□□ -1.52
SSX3Q99909 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.58□□□□□ -1.52
SSX3Q99909 AC007255.2-201ENST00000604053 631 ntBASIC5.58□□□□□ -1.52
SSX3Q99909 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.58□□□□□ -1.52
SSX3Q99909 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.58□□□□□ -1.52
SSX3Q99909 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.58□□□□□ -1.52
SSX3Q99909 AC244100.4-201ENST00000617747 388 ntBASIC5.58□□□□□ -1.52
SSX3Q99909 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSX3Q99909 AL138693.1-201ENST00000622219 129 ntBASIC5.58□□□□□ -1.52
SSX3Q99909 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC5.58□□□□□ -1.52
SSX3Q99909 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC5.58□□□□□ -1.52
SSX3Q99909 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSX3Q99909 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSX3Q99909 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSX3Q99909 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSX3Q99909 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSX3Q99909 ATP5BP1-201ENST00000411980 1574 ntBASIC5.58□□□□□ -1.52
SSX3Q99909 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.58□□□□□ -1.52
SSX3Q99909 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SSX3Q99909 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSX3Q99909 DOCK11P1-201ENST00000553480 5932 ntBASIC5.58□□□□□ -1.52
SSX3Q99909 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSX3Q99909 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSX3Q99909 AC015689.2-201ENST00000528172 1738 ntBASIC5.57□□□□□ -1.52
SSX3Q99909 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SSX3Q99909 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC5.57□□□□□ -1.52
SSX3Q99909 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms