Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 PGAM4P2-201ENST00000512491 721 ntBASIC8.03□□□□□ -1.12
SYNGAP1Q96PV0 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC8.03□□□□□ -1.12
SYNGAP1Q96PV0 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SYNGAP1Q96PV0 IGKV1OR22-1-201ENST00000521497 360 ntBASIC8.03□□□□□ -1.12
SYNGAP1Q96PV0 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC8.03□□□□□ -1.12
SYNGAP1Q96PV0 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC8.03□□□□□ -1.12
SYNGAP1Q96PV0 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC8.03□□□□□ -1.12
SYNGAP1Q96PV0 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC8.03□□□□□ -1.12
SYNGAP1Q96PV0 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC8.03□□□□□ -1.12
SYNGAP1Q96PV0 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC8.03□□□□□ -1.12
SYNGAP1Q96PV0 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC8.03□□□□□ -1.12
SYNGAP1Q96PV0 UBA2-208ENST00000592791 910 ntTSL 2 BASIC8.03□□□□□ -1.12
SYNGAP1Q96PV0 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC8.03□□□□□ -1.12
SYNGAP1Q96PV0 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC8.03□□□□□ -1.12
SYNGAP1Q96PV0 AC084373.1-201ENST00000603311 235 ntBASIC8.03□□□□□ -1.12
SYNGAP1Q96PV0 AP003499.2-201ENST00000624100 483 ntBASIC8.03□□□□□ -1.12
SYNGAP1Q96PV0 AC011471.4-201ENST00000638271 216 ntBASIC8.03□□□□□ -1.12
SYNGAP1Q96PV0 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC8.02□□□□□ -1.12
SYNGAP1Q96PV0 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.12
SYNGAP1Q96PV0 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC8.02□□□□□ -1.12
SYNGAP1Q96PV0 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 MTND4P26-201ENST00000415971 1359 ntBASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 ARHGAP42P4-201ENST00000549782 2934 ntBASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 SAMMSON-222ENST00000641901 2727 ntBASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 MKI67P1-201ENST00000604297 1460 ntBASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 AC018688.1-201ENST00000636528 1754 ntBASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 OR5H2-201ENST00000355273 945 ntBASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 MIR513B-201ENST00000385136 84 ntBASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 AL445238.1-204ENST00000400311 463 ntBASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 TRBV29OR9-2-201ENST00000427589 333 ntBASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 RPL5P2-201ENST00000429598 854 ntBASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 KCTD9P1-201ENST00000430462 1167 ntBASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 ZNF965P-201ENST00000432501 817 ntBASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 AL096829.2-201ENST00000446582 742 ntBASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 USP9YP25-201ENST00000457708 443 ntBASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 RBMY2HP-201ENST00000457961 720 ntBASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 OR9N1P-202ENST00000494289 481 ntBASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 RN7SL143P-201ENST00000496780 297 ntBASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 RGS5-220ENST00000528689 566 ntTSL 5 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 OR4C49P-201ENST00000563891 900 ntBASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 NBR2-204ENST00000587322 63 ntBASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 AL392048.1-201ENST00000613946 534 ntBASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 MIR8089-201ENST00000620165 82 ntBASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC8.02□□□□□ -1.13
SYNGAP1Q96PV0 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 AC102941.1-201ENST00000567616 1537 ntBASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 AC123769.2-201ENST00000624332 5984 ntBASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 AC011447.6-201ENST00000623510 2598 ntBASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms