Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 RPL31P11-202ENST00000454082 372 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 RPL19P11-201ENST00000495944 589 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 AC023818.1-201ENST00000498379 384 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 SNORA70.17-201ENST00000516449 133 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 MTND1P36-201ENST00000522384 936 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 AC027796.1-201ENST00000575593 512 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 PPIAP14-201ENST00000577627 496 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 AC020915.5-201ENST00000596836 964 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 AC245052.7-201ENST00000601161 359 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 AC036176.3-201ENST00000602456 418 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 AC020763.5-201ENST00000623298 430 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 AL121936.2-201ENST00000641935 662 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 CDY5P-201ENST00000411487 1580 ntBASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 CDY9P-201ENST00000451397 1580 ntBASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 U3.52-201ENST00000384034 216 ntBASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AC245036.1-201ENST00000391727 309 ntBASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 NPM1P38-201ENST00000403835 865 ntBASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 GABARAPL3-201ENST00000412799 354 ntBASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 MTND2P39-201ENST00000457230 764 ntBASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 TOPORSLP1-201ENST00000467693 2102 ntBASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AC022730.1-201ENST00000473114 568 ntBASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AC131392.1-201ENST00000506490 633 ntBASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AC073581.1-201ENST00000519036 575 ntBASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AC067852.5-201ENST00000589299 310 ntBASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AL713998.2-201ENST00000604538 1198 ntBASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 MIR6849-201ENST00000618543 69 ntBASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AL138960.2-201ENST00000625145 535 ntBASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 CLUHP10-201ENST00000631979 980 ntBASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AC005618.1-201ENST00000606901 3148 ntBASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 AC137056.2-201ENST00000624055 1958 ntBASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.35□□□□□ -1.23
CDK5RAP3Q96JB5 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms