Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 SNX18P23-201ENST00000510867 677 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 AC093878.1-201ENST00000515630 432 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VMP1Q96GC9 AC087752.2-201ENST00000521219 281 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 AL121839.1-201ENST00000556233 1185 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 AC067838.1-201ENST00000606064 577 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 Z95327.3-201ENST00000610385 572 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 AL137000.1-201ENST00000610528 1244 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 AC005858.3-201ENST00000624756 589 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
VMP1Q96GC9 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VMP1Q96GC9 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VMP1Q96GC9 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VMP1Q96GC9 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
VMP1Q96GC9 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VMP1Q96GC9 AC096921.2-201ENST00000561507 1916 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VMP1Q96GC9 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VMP1Q96GC9 AC005332.9-201ENST00000620266 2921 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 AC004023.1-201ENST00000561473 1744 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VMP1Q96GC9 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
VMP1Q96GC9 AC092701.1-201ENST00000623627 1551 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VMP1Q96GC9 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
VMP1Q96GC9 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.36□□□□□ -1.39
VMP1Q96GC9 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC6.36□□□□□ -1.39
VMP1Q96GC9 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
VMP1Q96GC9 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.36□□□□□ -1.39
VMP1Q96GC9 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
VMP1Q96GC9 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VMP1Q96GC9 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VMP1Q96GC9 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VMP1Q96GC9 RNA5SP382-201ENST00000363355 112 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 RN7SKP191-201ENST00000364713 306 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 RNA5SP279-201ENST00000365513 117 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 AP003170.5-201ENST00000397185 335 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 PTPN2P1-201ENST00000423212 1072 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.36□□□□□ -1.39
VMP1Q96GC9 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.36□□□□□ -1.39
VMP1Q96GC9 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.36□□□□□ -1.39
VMP1Q96GC9 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.36□□□□□ -1.39
VMP1Q96GC9 PSMD8P1-201ENST00000436275 769 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VMP1Q96GC9 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.36□□□□□ -1.39
VMP1Q96GC9 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VMP1Q96GC9 TVP23CP1-201ENST00000450317 639 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 MEF2AP1-201ENST00000454867 863 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 AC083806.1-201ENST00000468934 316 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 RN7SL790P-201ENST00000474043 298 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 AGGF1P3-201ENST00000493675 1213 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 RN7SL187P-201ENST00000495587 303 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 RPL23AP80-201ENST00000495605 424 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 AP000926.3-201ENST00000497201 299 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.36□□□□□ -1.39
VMP1Q96GC9 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
VMP1Q96GC9 AC021146.11-201ENST00000503319 491 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 AC021220.1-201ENST00000507445 630 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.36□□□□□ -1.39
VMP1Q96GC9 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
VMP1Q96GC9 MINOS1P4-201ENST00000515470 318 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.36□□□□□ -1.39
VMP1Q96GC9 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.36□□□□□ -1.39
VMP1Q96GC9 AP006587.5-201ENST00000532033 739 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.36□□□□□ -1.39
VMP1Q96GC9 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VMP1Q96GC9 AL591767.3-201ENST00000554632 525 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.36□□□□□ -1.39
VMP1Q96GC9 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.36□□□□□ -1.39
VMP1Q96GC9 HMGN1P26-201ENST00000558737 303 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 GTF2IP6-201ENST00000583143 541 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.36□□□□□ -1.39
VMP1Q96GC9 RPS4XP21-201ENST00000603814 750 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
VMP1Q96GC9 AC106782.7-201ENST00000624024 418 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 AC133555.5-201ENST00000624430 418 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 SNX18P10-201ENST00000625014 519 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 AC099654.6-201ENST00000636487 512 ntBASIC6.36□□□□□ -1.39
VMP1Q96GC9 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VMP1Q96GC9 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms