Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 RAB9AP5-201ENST00000437794 597 ntBASIC6.19□□□□□ -1.42
VPS33AQ96AX1 OSTCP2-201ENST00000437956 444 ntBASIC6.19□□□□□ -1.42
VPS33AQ96AX1 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 SNRPBP1-201ENST00000443634 282 ntBASIC6.19□□□□□ -1.42
VPS33AQ96AX1 RAB9AP2-201ENST00000443911 597 ntBASIC6.19□□□□□ -1.42
VPS33AQ96AX1 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 VN1R38P-201ENST00000450265 887 ntBASIC6.19□□□□□ -1.42
VPS33AQ96AX1 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 CTSLP6-201ENST00000458273 1002 ntBASIC6.19□□□□□ -1.42
VPS33AQ96AX1 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 RN7SL849P-201ENST00000485236 295 ntBASIC6.19□□□□□ -1.42
VPS33AQ96AX1 AC147055.1-201ENST00000509261 750 ntBASIC6.19□□□□□ -1.42
VPS33AQ96AX1 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 AL390198.2-201ENST00000510553 222 ntBASIC6.19□□□□□ -1.42
VPS33AQ96AX1 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 NPM1P52-201ENST00000518264 846 ntBASIC6.19□□□□□ -1.42
VPS33AQ96AX1 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.19□□□□□ -1.42
VPS33AQ96AX1 AC022784.5-201ENST00000522241 437 ntBASIC6.19□□□□□ -1.42
VPS33AQ96AX1 AC008429.2-201ENST00000523057 864 ntBASIC6.19□□□□□ -1.42
VPS33AQ96AX1 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 DCN-215ENST00000550099 719 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 EIF1AXP2-201ENST00000555940 413 ntBASIC6.19□□□□□ -1.42
VPS33AQ96AX1 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 FAM30C-201ENST00000561158 410 ntBASIC6.19□□□□□ -1.42
VPS33AQ96AX1 AC023389.2-201ENST00000580031 955 ntBASIC6.19□□□□□ -1.42
VPS33AQ96AX1 AC233702.7-202ENST00000582941 211 ntBASIC6.19□□□□□ -1.42
VPS33AQ96AX1 AL445649.1-201ENST00000615941 691 ntBASIC6.19□□□□□ -1.42
VPS33AQ96AX1 AP001153.1-201ENST00000641024 338 ntBASIC6.19□□□□□ -1.42
VPS33AQ96AX1 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS33AQ96AX1 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 AC092111.2-201ENST00000611627 1414 ntBASIC6.18□□□□□ -1.42
VPS33AQ96AX1 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 AL592429.1-201ENST00000403909 1473 ntBASIC6.18□□□□□ -1.42
VPS33AQ96AX1 RNU6-1331P-201ENST00000363658 106 ntBASIC6.18□□□□□ -1.42
VPS33AQ96AX1 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 LDHAP5-201ENST00000394996 622 ntBASIC6.18□□□□□ -1.42
VPS33AQ96AX1 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 AL590635.1-201ENST00000406314 586 ntBASIC6.18□□□□□ -1.42
VPS33AQ96AX1 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 RN7SKP161-201ENST00000411110 305 ntBASIC6.18□□□□□ -1.42
VPS33AQ96AX1 VN1R31P-201ENST00000417498 730 ntBASIC6.18□□□□□ -1.42
VPS33AQ96AX1 AC091492.1-201ENST00000419844 272 ntBASIC6.18□□□□□ -1.42
VPS33AQ96AX1 RPL7AP14-201ENST00000424041 802 ntBASIC6.18□□□□□ -1.42
VPS33AQ96AX1 UBE2V2P3-201ENST00000433562 437 ntBASIC6.18□□□□□ -1.42
VPS33AQ96AX1 AL157385.1-201ENST00000446973 268 ntBASIC6.18□□□□□ -1.42
VPS33AQ96AX1 PCMTD1P3-201ENST00000451824 472 ntBASIC6.18□□□□□ -1.42
VPS33AQ96AX1 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 SNX18P26-201ENST00000458433 740 ntBASIC6.18□□□□□ -1.42
VPS33AQ96AX1 UOX-201ENST00000471089 899 ntBASIC6.18□□□□□ -1.42
VPS33AQ96AX1 AC099340.1-201ENST00000475247 599 ntBASIC6.18□□□□□ -1.42
VPS33AQ96AX1 AC025271.1-201ENST00000485045 429 ntBASIC6.18□□□□□ -1.42
VPS33AQ96AX1 RPL5P14-201ENST00000494197 878 ntBASIC6.18□□□□□ -1.42
VPS33AQ96AX1 AC010409.2-201ENST00000505780 478 ntBASIC6.18□□□□□ -1.42
VPS33AQ96AX1 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.18□□□□□ -1.42
VPS33AQ96AX1 AC083964.1-201ENST00000607549 630 ntBASIC6.18□□□□□ -1.42
VPS33AQ96AX1 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 BIN2P1-201ENST00000504996 1530 ntBASIC6.18□□□□□ -1.42
VPS33AQ96AX1 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VPS33AQ96AX1 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms