Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.91□□□□□ -1.46
PTP4A1Q93096 AC010998.3-201ENST00000613871 631 ntBASIC5.91□□□□□ -1.46
PTP4A1Q93096 AC006328.2-201ENST00000623198 397 ntBASIC5.91□□□□□ -1.46
PTP4A1Q93096 AC012005.2-201ENST00000624333 397 ntBASIC5.91□□□□□ -1.46
PTP4A1Q93096 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.91□□□□□ -1.46
PTP4A1Q93096 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.91□□□□□ -1.46
PTP4A1Q93096 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.91□□□□□ -1.46
PTP4A1Q93096 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PTP4A1Q93096 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTP4A1Q93096 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.91□□□□□ -1.46
PTP4A1Q93096 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTP4A1Q93096 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
PTP4A1Q93096 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.91□□□□□ -1.46
PTP4A1Q93096 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.91□□□□□ -1.46
PTP4A1Q93096 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTP4A1Q93096 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.91□□□□□ -1.46
PTP4A1Q93096 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTP4A1Q93096 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTP4A1Q93096 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTP4A1Q93096 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTP4A1Q93096 DOCK11P1-201ENST00000553480 5932 ntBASIC5.9□□□□□ -1.46
PTP4A1Q93096 AC232271.1-201ENST00000602455 2715 ntBASIC5.9□□□□□ -1.46
PTP4A1Q93096 NLRP3P1-201ENST00000622303 1785 ntBASIC5.9□□□□□ -1.46
PTP4A1Q93096 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTP4A1Q93096 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.9□□□□□ -1.46
PTP4A1Q93096 WDR95P-201ENST00000425638 1542 ntBASIC5.9□□□□□ -1.46
PTP4A1Q93096 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
PTP4A1Q93096 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTP4A1Q93096 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTP4A1Q93096 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.9□□□□□ -1.46
PTP4A1Q93096 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.9□□□□□ -1.46
PTP4A1Q93096 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.9□□□□□ -1.46
PTP4A1Q93096 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PTP4A1Q93096 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTP4A1Q93096 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTP4A1Q93096 RN7SKP189-201ENST00000365042 330 ntBASIC5.9□□□□□ -1.46
PTP4A1Q93096 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PTP4A1Q93096 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.9□□□□□ -1.46
PTP4A1Q93096 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.9□□□□□ -1.46
PTP4A1Q93096 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.9□□□□□ -1.46
PTP4A1Q93096 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.9□□□□□ -1.46
PTP4A1Q93096 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.9□□□□□ -1.46
PTP4A1Q93096 RPSAP24-201ENST00000461543 873 ntBASIC5.9□□□□□ -1.46
PTP4A1Q93096 HMGN1P8-201ENST00000463578 288 ntBASIC5.9□□□□□ -1.46
PTP4A1Q93096 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.9□□□□□ -1.46
PTP4A1Q93096 AGGF1P3-201ENST00000493675 1213 ntBASIC5.9□□□□□ -1.46
PTP4A1Q93096 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.9□□□□□ -1.46
PTP4A1Q93096 AC073916.1-201ENST00000545095 130 ntBASIC5.9□□□□□ -1.46
PTP4A1Q93096 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.9□□□□□ -1.46
PTP4A1Q93096 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC5.9□□□□□ -1.46
PTP4A1Q93096 AC069240.2-201ENST00000550242 609 ntBASIC5.9□□□□□ -1.46
PTP4A1Q93096 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PTP4A1Q93096 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.9□□□□□ -1.46
PTP4A1Q93096 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.9□□□□□ -1.46
PTP4A1Q93096 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.9□□□□□ -1.46
PTP4A1Q93096 BUB1P1-201ENST00000603541 607 ntBASIC5.9□□□□□ -1.46
PTP4A1Q93096 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.9□□□□□ -1.46
PTP4A1Q93096 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.9□□□□□ -1.46
PTP4A1Q93096 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC5.9□□□□□ -1.46
PTP4A1Q93096 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.9□□□□□ -1.46
PTP4A1Q93096 AC006453.3-201ENST00000635891 377 ntBASIC5.9□□□□□ -1.46
PTP4A1Q93096 AL121936.2-201ENST00000641935 662 ntBASIC5.9□□□□□ -1.46
PTP4A1Q93096 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PTP4A1Q93096 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PTP4A1Q93096 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
PTP4A1Q93096 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
PTP4A1Q93096 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.9□□□□□ -1.47
PTP4A1Q93096 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PTP4A1Q93096 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTP4A1Q93096 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTP4A1Q93096 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTP4A1Q93096 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTP4A1Q93096 HSPD1P7-201ENST00000447985 1686 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTP4A1Q93096 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTP4A1Q93096 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTP4A1Q93096 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTP4A1Q93096 NPM1P14-201ENST00000343743 866 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 AC074375.1-201ENST00000372993 192 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 AL672167.2-201ENST00000377164 879 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 NPM1P37-201ENST00000403105 874 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 AL451061.1-201ENST00000407887 862 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 AL139100.1-201ENST00000408001 498 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 RNA5SP115-201ENST00000411160 107 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 AC106901.1-201ENST00000425086 698 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 ST13P21-201ENST00000453250 1098 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 RPL26P30-201ENST00000453533 435 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 RBMY2EP-202ENST00000456360 940 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 TREML3P-201ENST00000457327 501 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms