Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL356801.1-201ENST00000559320 294 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 MAPK10-338ENST00000641647 3362 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 RBM27-201ENST00000265271 6451 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AC004014.2-201ENST00000623718 5122 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 U3.2-201ENST00000362981 210 ntBASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 RNA5SP131-201ENST00000365452 119 ntBASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 AL645733.1-201ENST00000402250 217 ntBASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 SEPT14P12-201ENST00000442280 560 ntBASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 AURKAPS1-201ENST00000451805 1212 ntBASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 LRRC37A14P-201ENST00000452297 462 ntBASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 CBX1P5-201ENST00000475330 559 ntBASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 RPL23AP68-201ENST00000480924 445 ntBASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 AC068522.1-201ENST00000482895 345 ntBASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 AC009120.1-201ENST00000493458 473 ntBASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 RN7SL708P-201ENST00000580952 299 ntBASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 FKBP1AP1-201ENST00000594588 318 ntBASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 AC008115.4-201ENST00000619780 775 ntBASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 AC010480.1-201ENST00000624823 684 ntBASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 AC023245.2-201ENST00000530760 2978 ntBASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 MUC3A-201ENST00000379458 11226 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.74
ALMS1Q8TCU4 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 Z80107.2-201ENST00000445127 392 ntBASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 HMGN2P36-201ENST00000529541 409 ntBASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 PRELID3BP3-201ENST00000584963 545 ntBASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 MIR7159-201ENST00000620587 66 ntBASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 AL450226.2-201ENST00000622913 439 ntBASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 AC011416.1-201ENST00000514947 1732 ntBASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 OR4C1P-202ENST00000641065 1569 ntBASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 MIR433-201ENST00000384837 93 ntBASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 SNORA11-201ENST00000408789 128 ntBASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 AC108161.1-201ENST00000461060 402 ntBASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 RN7SL269P-201ENST00000467795 305 ntBASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 SNORA58-201ENST00000505219 137 ntBASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 SETP3-201ENST00000581726 813 ntBASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 OR7A1P-201ENST00000601206 970 ntBASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 AC021766.1-201ENST00000624404 741 ntBASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 OR8B9P-202ENST00000642028 5216 ntBASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 FRMPD3-201ENST00000276185 7304 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 LINC02019-201ENST00000608605 2060 ntBASIC4.15□□□□□ -1.75
ALMS1Q8TCU4 IL6ST-206ENST00000381298 9057 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 FAR2P1-206ENST00000449736 709 ntBASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 SIAH1P1-201ENST00000479411 923 ntBASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 LAPTM4BP2-201ENST00000604542 446 ntBASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 AC025171.4-201ENST00000607250 1047 ntBASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALMS1Q8TCU4 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms