Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.9□□□□□ -1.14
SYNE4Q8N205 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
SYNE4Q8N205 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
SYNE4Q8N205 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.15
SYNE4Q8N205 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.9□□□□□ -1.15
SYNE4Q8N205 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
SYNE4Q8N205 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
SYNE4Q8N205 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.9□□□□□ -1.15
SYNE4Q8N205 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.9□□□□□ -1.15
SYNE4Q8N205 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
SYNE4Q8N205 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SYNE4Q8N205 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.89□□□□□ -1.15
SYNE4Q8N205 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SYNE4Q8N205 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
SYNE4Q8N205 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SYNE4Q8N205 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SYNE4Q8N205 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SYNE4Q8N205 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.89□□□□□ -1.15
SYNE4Q8N205 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
SYNE4Q8N205 RNA5SP273-201ENST00000362484 113 ntBASIC7.89□□□□□ -1.15
SYNE4Q8N205 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SYNE4Q8N205 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.89□□□□□ -1.15
SYNE4Q8N205 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.89□□□□□ -1.15
SYNE4Q8N205 ELOCP6-201ENST00000429066 328 ntBASIC7.89□□□□□ -1.15
SYNE4Q8N205 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.89□□□□□ -1.15
SYNE4Q8N205 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.89□□□□□ -1.15
SYNE4Q8N205 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.89□□□□□ -1.15
SYNE4Q8N205 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SYNE4Q8N205 ELOCP12-201ENST00000458706 328 ntBASIC7.89□□□□□ -1.15
SYNE4Q8N205 SLC25A14P1-201ENST00000502867 901 ntBASIC7.89□□□□□ -1.15
SYNE4Q8N205 MTND6P8-201ENST00000503471 522 ntBASIC7.89□□□□□ -1.15
SYNE4Q8N205 AC022616.2-201ENST00000523185 300 ntBASIC7.89□□□□□ -1.15
SYNE4Q8N205 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.89□□□□□ -1.15
SYNE4Q8N205 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SYNE4Q8N205 NPIPB1P-202ENST00000588786 828 ntBASIC7.89□□□□□ -1.15
SYNE4Q8N205 AL023583.1-201ENST00000607518 1143 ntBASIC7.89□□□□□ -1.15
SYNE4Q8N205 AC024933.1-201ENST00000608472 348 ntBASIC7.89□□□□□ -1.15
SYNE4Q8N205 AL356094.1-201ENST00000624663 1212 ntBASIC7.89□□□□□ -1.15
SYNE4Q8N205 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SYNE4Q8N205 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.89□□□□□ -1.15
SYNE4Q8N205 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
SYNE4Q8N205 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
SYNE4Q8N205 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SYNE4Q8N205 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.89□□□□□ -1.15
SYNE4Q8N205 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SYNE4Q8N205 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SYNE4Q8N205 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SYNE4Q8N205 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SYNE4Q8N205 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.89□□□□□ -1.15
SYNE4Q8N205 AC011592.1-201ENST00000624647 3634 ntBASIC7.89□□□□□ -1.15
SYNE4Q8N205 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SYNE4Q8N205 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.89□□□□□ -1.15
SYNE4Q8N205 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNE4Q8N205 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNE4Q8N205 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SYNE4Q8N205 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNE4Q8N205 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 TMSB4XP2-201ENST00000335179 210 ntBASIC7.88□□□□□ -1.15
SYNE4Q8N205 RNA5SP477-201ENST00000362639 119 ntBASIC7.88□□□□□ -1.15
SYNE4Q8N205 RN7SKP278-201ENST00000410504 342 ntBASIC7.88□□□□□ -1.15
SYNE4Q8N205 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 IGLV3-4-201ENST00000432300 244 ntBASIC7.88□□□□□ -1.15
SYNE4Q8N205 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SYNE4Q8N205 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 SUMO2P1-206ENST00000445436 284 ntBASIC7.88□□□□□ -1.15
SYNE4Q8N205 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.88□□□□□ -1.15
SYNE4Q8N205 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 RN7SL326P-201ENST00000477493 296 ntBASIC7.88□□□□□ -1.15
SYNE4Q8N205 RN7SL273P-201ENST00000481561 299 ntBASIC7.88□□□□□ -1.15
SYNE4Q8N205 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 AL021368.1-201ENST00000607490 540 ntBASIC7.88□□□□□ -1.15
SYNE4Q8N205 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC7.88□□□□□ -1.15
SYNE4Q8N205 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms