Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
TRIM48Q8IWZ4 LINC01616-201ENST00000561816 2280 ntBASIC6.9□□□□□ -1.31
TRIM48Q8IWZ4 MTND4P8-201ENST00000514997 1362 ntBASIC6.9□□□□□ -1.31
TRIM48Q8IWZ4 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
TRIM48Q8IWZ4 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
TRIM48Q8IWZ4 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.9□□□□□ -1.31
TRIM48Q8IWZ4 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 AL133243.4-201ENST00000623116 3109 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 ST13P16-201ENST00000401760 781 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 Z86062.1-201ENST00000406773 777 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 NPM1P36-201ENST00000415681 835 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 LIPT1P1-201ENST00000415870 1186 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 YWHAZP5-201ENST00000419975 730 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 CDY12P-201ENST00000440679 1015 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 AC027124.1-201ENST00000440852 466 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 OR10R1P-201ENST00000441524 1141 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 CDY13P-201ENST00000445813 1015 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 AC092155.2-201ENST00000454675 477 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 GAPDHP53-201ENST00000458397 924 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 AC020779.1-201ENST00000478757 796 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 SSU72P6-201ENST00000532644 488 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 AC096708.2-201ENST00000577676 512 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 MIR5682-201ENST00000584864 76 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 AC012065.3-201ENST00000602736 439 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 AC099785.1-201ENST00000605697 437 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 AC063962.1-201ENST00000608199 521 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 MIR6070-201ENST00000613967 103 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 RN7SL126P-201ENST00000616400 299 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 AC126474.2-201ENST00000623268 1750 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 OR2A3P-202ENST00000641249 1776 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 RAD17P2-201ENST00000451754 1977 ntBASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM48Q8IWZ4 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 OR4G1P-202ENST00000641173 1788 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 HSPD1P1-201ENST00000503199 1726 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 ZNF812P-201ENST00000457674 1694 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 AC068733.2-201ENST00000605434 1418 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 RNU6-1331P-201ENST00000363658 106 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 AC006511.2-201ENST00000388966 660 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 EEF1GP6-201ENST00000402309 905 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 HMGB3P19-201ENST00000403971 560 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms