Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.79□□□□□ -1.48
SCN1BQ07699 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
SCN1BQ07699 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SCN1BQ07699 AC232271.1-201ENST00000602455 2715 ntBASIC5.79□□□□□ -1.48
SCN1BQ07699 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SCN1BQ07699 AL359976.1-201ENST00000418655 3528 ntBASIC5.79□□□□□ -1.48
SCN1BQ07699 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
SCN1BQ07699 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SCN1BQ07699 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.79□□□□□ -1.48
SCN1BQ07699 CASC19-228ENST00000641414 1684 ntBASIC5.79□□□□□ -1.48
SCN1BQ07699 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SCN1BQ07699 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SCN1BQ07699 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SCN1BQ07699 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
SCN1BQ07699 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SCN1BQ07699 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SCN1BQ07699 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SCN1BQ07699 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
SCN1BQ07699 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SCN1BQ07699 RNU12-2P-201ENST00000364789 156 ntBASIC5.78□□□□□ -1.48
SCN1BQ07699 OR13C3-201ENST00000374781 1108 ntBASIC5.78□□□□□ -1.48
SCN1BQ07699 AL023284.3-201ENST00000407767 334 ntBASIC5.78□□□□□ -1.48
SCN1BQ07699 CYCSP17-201ENST00000407870 315 ntBASIC5.78□□□□□ -1.48
SCN1BQ07699 RN7SKP39-201ENST00000410773 322 ntBASIC5.78□□□□□ -1.48
SCN1BQ07699 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.78□□□□□ -1.48
SCN1BQ07699 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC5.78□□□□□ -1.48
SCN1BQ07699 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC5.78□□□□□ -1.48
SCN1BQ07699 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SCN1BQ07699 OR5W1P-201ENST00000423705 938 ntBASIC5.78□□□□□ -1.48
SCN1BQ07699 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC5.78□□□□□ -1.48
SCN1BQ07699 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SCN1BQ07699 OR52U1P-201ENST00000439752 923 ntBASIC5.78□□□□□ -1.48
SCN1BQ07699 ARAFP2-201ENST00000440565 559 ntBASIC5.78□□□□□ -1.48
SCN1BQ07699 AL353803.3-201ENST00000444641 335 ntBASIC5.78□□□□□ -1.48
SCN1BQ07699 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC5.78□□□□□ -1.48
SCN1BQ07699 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC5.78□□□□□ -1.48
SCN1BQ07699 SNRPCP3-201ENST00000474888 476 ntBASIC5.78□□□□□ -1.48
SCN1BQ07699 AC022336.1-201ENST00000475510 337 ntBASIC5.78□□□□□ -1.48
SCN1BQ07699 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.78□□□□□ -1.48
SCN1BQ07699 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC5.78□□□□□ -1.48
SCN1BQ07699 IGLC4-201ENST00000517690 248 ntBASIC5.78□□□□□ -1.48
SCN1BQ07699 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC5.78□□□□□ -1.48
SCN1BQ07699 PHBP2-201ENST00000532859 806 ntBASIC5.78□□□□□ -1.48
SCN1BQ07699 AC073916.1-201ENST00000545095 130 ntBASIC5.78□□□□□ -1.48
SCN1BQ07699 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.78□□□□□ -1.48
SCN1BQ07699 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SCN1BQ07699 EIF4A3P1-201ENST00000578499 647 ntBASIC5.78□□□□□ -1.48
SCN1BQ07699 AP006587.6-201ENST00000582128 1091 ntBASIC5.78□□□□□ -1.48
SCN1BQ07699 AC020914.7-201ENST00000594477 545 ntBASIC5.78□□□□□ -1.48
SCN1BQ07699 AC007255.2-201ENST00000604053 631 ntBASIC5.78□□□□□ -1.48
SCN1BQ07699 AC012510.1-201ENST00000607946 759 ntBASIC5.78□□□□□ -1.48
SCN1BQ07699 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SCN1BQ07699 AC119674.1-202ENST00000641333 1860 ntBASIC5.78□□□□□ -1.48
SCN1BQ07699 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SCN1BQ07699 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SCN1BQ07699 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.78□□□□□ -1.48
SCN1BQ07699 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.78□□□□□ -1.48
SCN1BQ07699 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SCN1BQ07699 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SCN1BQ07699 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SCN1BQ07699 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SCN1BQ07699 AC092070.2-203ENST00000598377 3644 ntBASIC5.78□□□□□ -1.48
SCN1BQ07699 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
SCN1BQ07699 MAPK10-287ENST00000641217 3037 ntBASIC5.77□□□□□ -1.49
SCN1BQ07699 HSP90AA2P-201ENST00000530115 2196 ntBASIC5.77□□□□□ -1.49
SCN1BQ07699 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCN1BQ07699 AC087516.1-201ENST00000561236 2428 ntBASIC5.77□□□□□ -1.49
SCN1BQ07699 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCN1BQ07699 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.77□□□□□ -1.49
SCN1BQ07699 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCN1BQ07699 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SCN1BQ07699 AC105235.1-201ENST00000623208 1816 ntBASIC5.77□□□□□ -1.49
SCN1BQ07699 AL121835.1-201ENST00000404250 354 ntBASIC5.77□□□□□ -1.49
SCN1BQ07699 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCN1BQ07699 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.77□□□□□ -1.49
SCN1BQ07699 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC5.77□□□□□ -1.49
SCN1BQ07699 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCN1BQ07699 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.77□□□□□ -1.49
SCN1BQ07699 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
SCN1BQ07699 AL392003.1-201ENST00000434394 243 ntBASIC5.77□□□□□ -1.49
SCN1BQ07699 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCN1BQ07699 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC5.77□□□□□ -1.49
SCN1BQ07699 AC005517.1-201ENST00000452091 489 ntBASIC5.77□□□□□ -1.49
SCN1BQ07699 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC5.77□□□□□ -1.49
SCN1BQ07699 GAPDHP53-201ENST00000458397 924 ntBASIC5.77□□□□□ -1.49
SCN1BQ07699 RN7SL216P-201ENST00000471607 298 ntBASIC5.77□□□□□ -1.49
SCN1BQ07699 RN7SL849P-201ENST00000485236 295 ntBASIC5.77□□□□□ -1.49
SCN1BQ07699 RN7SL518P-201ENST00000491887 280 ntBASIC5.77□□□□□ -1.49
SCN1BQ07699 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.77□□□□□ -1.49
SCN1BQ07699 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.77□□□□□ -1.49
SCN1BQ07699 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.77□□□□□ -1.49
SCN1BQ07699 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.77□□□□□ -1.49
SCN1BQ07699 IGHVIII-25-1-201ENST00000522143 241 ntBASIC5.77□□□□□ -1.49
SCN1BQ07699 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC5.77□□□□□ -1.49
SCN1BQ07699 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.77□□□□□ -1.49
SCN1BQ07699 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC5.77□□□□□ -1.49
SCN1BQ07699 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.77□□□□□ -1.49
SCN1BQ07699 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.77□□□□□ -1.49
SCN1BQ07699 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC5.77□□□□□ -1.49
SCN1BQ07699 EXOSC3P2-201ENST00000594464 497 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms