Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 HSPD1P7-201ENST00000447985 1686 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.21□□□□□ -1.42
SUMO3P55854 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SUMO3P55854 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SUMO3P55854 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SUMO3P55854 RNU1-24P-201ENST00000364285 165 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
SUMO3P55854 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.21□□□□□ -1.42
SUMO3P55854 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.21□□□□□ -1.42
SUMO3P55854 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.21□□□□□ -1.42
SUMO3P55854 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SUMO3P55854 LDHAP5-201ENST00000394996 622 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 CYCSP17-201ENST00000407870 315 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 RNU6-584P-201ENST00000410350 95 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 RNA5SP231-201ENST00000410496 138 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 RPL26P37-201ENST00000411983 438 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.21□□□□□ -1.42
SUMO3P55854 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SUMO3P55854 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.21□□□□□ -1.42
SUMO3P55854 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.21□□□□□ -1.42
SUMO3P55854 MTCYBP21-201ENST00000443300 1113 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.21□□□□□ -1.42
SUMO3P55854 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.21□□□□□ -1.42
SUMO3P55854 AL133480.2-201ENST00000456723 487 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 AC008379.1-201ENST00000463655 464 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.21□□□□□ -1.42
SUMO3P55854 RN7SL390P-201ENST00000470634 284 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.21□□□□□ -1.42
SUMO3P55854 PPM1AP1-201ENST00000502740 1135 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.21□□□□□ -1.42
SUMO3P55854 SNX18P23-201ENST00000510867 677 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 AC106800.2-201ENST00000514009 1103 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SUMO3P55854 OR8X1P-201ENST00000534542 869 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SUMO3P55854 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SUMO3P55854 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SUMO3P55854 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.21□□□□□ -1.42
SUMO3P55854 PPIAP6-201ENST00000557078 499 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SUMO3P55854 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.21□□□□□ -1.42
SUMO3P55854 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.21□□□□□ -1.42
SUMO3P55854 CBX3P2-202ENST00000583365 535 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 AC090774.2-201ENST00000584708 322 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.21□□□□□ -1.42
SUMO3P55854 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.21□□□□□ -1.42
SUMO3P55854 AC008147.4-201ENST00000617570 1204 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC6.21□□□□□ -1.42
SUMO3P55854 AC099654.8-201ENST00000637757 681 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SUMO3P55854 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SUMO3P55854 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SUMO3P55854 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
SUMO3P55854 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SUMO3P55854 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SUMO3P55854 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SUMO3P55854 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SUMO3P55854 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SUMO3P55854 AC005839.1-201ENST00000624148 3213 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SUMO3P55854 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SUMO3P55854 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SUMO3P55854 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.21□□□□□ -1.42
SUMO3P55854 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.21□□□□□ -1.42
SUMO3P55854 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SUMO3P55854 AC009237.3-203ENST00000442128 3551 ntBASIC6.21□□□□□ -1.42
SUMO3P55854 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
SUMO3P55854 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.21□□□□□ -1.42
SUMO3P55854 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.2□□□□□ -1.42
SUMO3P55854 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.2□□□□□ -1.42
SUMO3P55854 AC116158.1-201ENST00000560231 2129 ntBASIC6.2□□□□□ -1.42
SUMO3P55854 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SUMO3P55854 TRIM53CP-201ENST00000531490 1354 ntBASIC6.2□□□□□ -1.42
SUMO3P55854 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SUMO3P55854 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SUMO3P55854 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SUMO3P55854 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
SUMO3P55854 AC092821.2-201ENST00000545710 2042 ntBASIC6.2□□□□□ -1.42
SUMO3P55854 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SUMO3P55854 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SUMO3P55854 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SUMO3P55854 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SUMO3P55854 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SUMO3P55854 RNA5SP429-201ENST00000363688 109 ntBASIC6.2□□□□□ -1.42
SUMO3P55854 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SUMO3P55854 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.2□□□□□ -1.42
SUMO3P55854 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SUMO3P55854 BX664727.1-201ENST00000416024 466 ntBASIC6.2□□□□□ -1.42
SUMO3P55854 VN1R42P-201ENST00000424651 344 ntBASIC6.2□□□□□ -1.42
SUMO3P55854 CLNS1AP1-201ENST00000435954 682 ntBASIC6.2□□□□□ -1.42
SUMO3P55854 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.2□□□□□ -1.42
SUMO3P55854 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC6.2□□□□□ -1.42
SUMO3P55854 AL353898.1-201ENST00000444055 238 ntBASIC6.2□□□□□ -1.42
SUMO3P55854 AC092106.1-201ENST00000444291 373 ntBASIC6.2□□□□□ -1.42
SUMO3P55854 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.2□□□□□ -1.42
SUMO3P55854 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.2□□□□□ -1.42
SUMO3P55854 RPL7P55-201ENST00000450522 746 ntBASIC6.2□□□□□ -1.42
SUMO3P55854 RBMY2EP-202ENST00000456360 940 ntBASIC6.2□□□□□ -1.42
SUMO3P55854 AL354872.1-201ENST00000456361 967 ntBASIC6.2□□□□□ -1.42
SUMO3P55854 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms