Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.98□□□□□ -1.45
LIM2P55344 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.98□□□□□ -1.45
LIM2P55344 AC103968.1-201ENST00000557841 573 ntBASIC5.98□□□□□ -1.45
LIM2P55344 MIR6811-201ENST00000620409 58 ntBASIC5.98□□□□□ -1.45
LIM2P55344 MIR7159-201ENST00000620587 66 ntBASIC5.98□□□□□ -1.45
LIM2P55344 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.98□□□□□ -1.45
LIM2P55344 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.98□□□□□ -1.45
LIM2P55344 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LIM2P55344 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.98□□□□□ -1.45
LIM2P55344 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
LIM2P55344 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.98□□□□□ -1.45
LIM2P55344 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
LIM2P55344 GUCY1B2-204ENST00000531898 1979 ntBASIC5.98□□□□□ -1.45
LIM2P55344 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LIM2P55344 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.98□□□□□ -1.45
LIM2P55344 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.98□□□□□ -1.45
LIM2P55344 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.98□□□□□ -1.45
LIM2P55344 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.98□□□□□ -1.45
LIM2P55344 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.98□□□□□ -1.45
LIM2P55344 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LIM2P55344 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LIM2P55344 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LIM2P55344 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.97□□□□□ -1.45
LIM2P55344 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIM2P55344 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIM2P55344 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LIM2P55344 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LIM2P55344 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.97□□□□□ -1.45
LIM2P55344 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LIM2P55344 AC009831.5-201ENST00000624000 3189 ntBASIC5.97□□□□□ -1.45
LIM2P55344 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIM2P55344 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LIM2P55344 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIM2P55344 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.97□□□□□ -1.45
LIM2P55344 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIM2P55344 AC121334.1-201ENST00000396414 802 ntBASIC5.97□□□□□ -1.45
LIM2P55344 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LIM2P55344 AL157702.1-201ENST00000398764 426 ntBASIC5.97□□□□□ -1.45
LIM2P55344 RN7SKP161-201ENST00000411110 305 ntBASIC5.97□□□□□ -1.45
LIM2P55344 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.97□□□□□ -1.45
LIM2P55344 MTND2P12-201ENST00000417560 1252 ntBASIC5.97□□□□□ -1.45
LIM2P55344 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.97□□□□□ -1.45
LIM2P55344 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.97□□□□□ -1.45
LIM2P55344 AC112492.2-201ENST00000432774 1030 ntBASIC5.97□□□□□ -1.45
LIM2P55344 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.97□□□□□ -1.45
LIM2P55344 AC013403.1-201ENST00000436954 263 ntBASIC5.97□□□□□ -1.45
LIM2P55344 CXCR2P1-202ENST00000443392 1074 ntBASIC5.97□□□□□ -1.45
LIM2P55344 POU5F1P5-201ENST00000445059 658 ntBASIC5.97□□□□□ -1.45
LIM2P55344 AC097359.1-201ENST00000447946 463 ntBASIC5.97□□□□□ -1.45
LIM2P55344 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.97□□□□□ -1.45
LIM2P55344 H3F3AP5-201ENST00000475267 429 ntBASIC5.97□□□□□ -1.45
LIM2P55344 AC098818.1-201ENST00000478593 252 ntBASIC5.97□□□□□ -1.45
LIM2P55344 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LIM2P55344 AC092349.1-201ENST00000504903 310 ntBASIC5.97□□□□□ -1.45
LIM2P55344 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.97□□□□□ -1.45
LIM2P55344 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.97□□□□□ -1.45
LIM2P55344 RNA5SP206-201ENST00000516703 121 ntBASIC5.97□□□□□ -1.45
LIM2P55344 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.97□□□□□ -1.45
LIM2P55344 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.97□□□□□ -1.45
LIM2P55344 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.97□□□□□ -1.45
LIM2P55344 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LIM2P55344 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.97□□□□□ -1.45
LIM2P55344 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.97□□□□□ -1.45
LIM2P55344 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.97□□□□□ -1.45
LIM2P55344 AC138207.8-204ENST00000579588 527 ntBASIC5.97□□□□□ -1.45
LIM2P55344 PRELID3BP3-201ENST00000584963 545 ntBASIC5.97□□□□□ -1.45
LIM2P55344 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.97□□□□□ -1.45
LIM2P55344 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.97□□□□□ -1.45
LIM2P55344 AC244100.4-201ENST00000617747 388 ntBASIC5.97□□□□□ -1.45
LIM2P55344 AC048341.3-201ENST00000619323 491 ntBASIC5.97□□□□□ -1.45
LIM2P55344 AC010325.3-201ENST00000641084 394 ntBASIC5.97□□□□□ -1.45
LIM2P55344 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
LIM2P55344 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIM2P55344 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIM2P55344 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIM2P55344 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIM2P55344 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
LIM2P55344 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
LIM2P55344 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
LIM2P55344 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.96□□□□□ -1.45
LIM2P55344 AL353763.1-201ENST00000624467 1628 ntBASIC5.96□□□□□ -1.45
LIM2P55344 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
LIM2P55344 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.96□□□□□ -1.45
LIM2P55344 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
LIM2P55344 MTND4LP17-201ENST00000414607 293 ntBASIC5.96□□□□□ -1.46
LIM2P55344 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.96□□□□□ -1.46
LIM2P55344 VN1R20P-201ENST00000425215 966 ntBASIC5.96□□□□□ -1.46
LIM2P55344 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.96□□□□□ -1.46
LIM2P55344 SOCS5P1-201ENST00000440415 949 ntBASIC5.96□□□□□ -1.46
LIM2P55344 RPL9P15-201ENST00000491096 532 ntBASIC5.96□□□□□ -1.46
LIM2P55344 KHDC1P1-201ENST00000511053 508 ntBASIC5.96□□□□□ -1.46
LIM2P55344 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.96□□□□□ -1.46
LIM2P55344 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.96□□□□□ -1.46
LIM2P55344 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.96□□□□□ -1.46
LIM2P55344 AC005632.2-201ENST00000564271 828 ntBASIC5.96□□□□□ -1.46
LIM2P55344 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.96□□□□□ -1.46
LIM2P55344 AC011500.1-201ENST00000601963 469 ntBASIC5.96□□□□□ -1.46
LIM2P55344 AC024589.2-201ENST00000605642 1294 ntBASIC5.96□□□□□ -1.46
LIM2P55344 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.96□□□□□ -1.46
LIM2P55344 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms