Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.99□□□□□ -1.29
VCPP55072 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VCPP55072 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
VCPP55072 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VCPP55072 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
VCPP55072 AL359694.2-201ENST00000567753 1615 ntBASIC6.98□□□□□ -1.29
VCPP55072 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.98□□□□□ -1.29
VCPP55072 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
VCPP55072 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
VCPP55072 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VCPP55072 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VCPP55072 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
VCPP55072 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VCPP55072 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
VCPP55072 SNORA17A-201ENST00000391185 133 ntBASIC6.98□□□□□ -1.29
VCPP55072 RNA5SP474-201ENST00000391234 90 ntBASIC6.98□□□□□ -1.29
VCPP55072 UBBP1-201ENST00000392399 473 ntBASIC6.98□□□□□ -1.29
VCPP55072 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.98□□□□□ -1.29
VCPP55072 HMGN1P20-201ENST00000411849 300 ntBASIC6.98□□□□□ -1.29
VCPP55072 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.98□□□□□ -1.29
VCPP55072 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.98□□□□□ -1.29
VCPP55072 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.98□□□□□ -1.29
VCPP55072 RPS10P21-201ENST00000430654 475 ntBASIC6.98□□□□□ -1.29
VCPP55072 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.98□□□□□ -1.29
VCPP55072 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.98□□□□□ -1.29
VCPP55072 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VCPP55072 AL139156.3-201ENST00000454802 394 ntBASIC6.98□□□□□ -1.29
VCPP55072 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.98□□□□□ -1.29
VCPP55072 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.98□□□□□ -1.29
VCPP55072 RN7SL284P-201ENST00000498823 275 ntBASIC6.98□□□□□ -1.29
VCPP55072 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
VCPP55072 AC021146.11-201ENST00000503319 491 ntBASIC6.98□□□□□ -1.29
VCPP55072 SNORA58-201ENST00000505219 137 ntBASIC6.98□□□□□ -1.29
VCPP55072 AC091849.1-201ENST00000509920 121 ntBASIC6.98□□□□□ -1.29
VCPP55072 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.98□□□□□ -1.29
VCPP55072 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
VCPP55072 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.98□□□□□ -1.29
VCPP55072 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.98□□□□□ -1.29
VCPP55072 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.98□□□□□ -1.29
VCPP55072 AC090022.1-201ENST00000546569 311 ntBASIC6.98□□□□□ -1.29
VCPP55072 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.98□□□□□ -1.29
VCPP55072 AC002519.2-203ENST00000567043 837 ntBASIC6.98□□□□□ -1.29
VCPP55072 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VCPP55072 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.98□□□□□ -1.29
VCPP55072 AC013244.1-201ENST00000604279 193 ntBASIC6.98□□□□□ -1.29
VCPP55072 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.98□□□□□ -1.29
VCPP55072 SNORA17.5-201ENST00000630429 132 ntBASIC6.98□□□□□ -1.29
VCPP55072 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
VCPP55072 TNPO1P2-201ENST00000426249 2665 ntBASIC6.98□□□□□ -1.29
VCPP55072 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.98□□□□□ -1.29
VCPP55072 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.98□□□□□ -1.29
VCPP55072 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.98□□□□□ -1.29
VCPP55072 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VCPP55072 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.98□□□□□ -1.29
VCPP55072 AC005618.1-201ENST00000606901 3148 ntBASIC6.98□□□□□ -1.29
VCPP55072 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
VCPP55072 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VCPP55072 AP002370.1-201ENST00000528055 1602 ntBASIC6.98□□□□□ -1.29
VCPP55072 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.98□□□□□ -1.29
VCPP55072 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
VCPP55072 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VCPP55072 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
VCPP55072 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
VCPP55072 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VCPP55072 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.97□□□□□ -1.29
VCPP55072 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
VCPP55072 RNA5SP510-201ENST00000364697 99 ntBASIC6.97□□□□□ -1.29
VCPP55072 RN7SKP278-201ENST00000410504 342 ntBASIC6.97□□□□□ -1.29
VCPP55072 AL035422.1-201ENST00000414193 397 ntBASIC6.97□□□□□ -1.29
VCPP55072 RPS14P4-201ENST00000415880 418 ntBASIC6.97□□□□□ -1.29
VCPP55072 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.97□□□□□ -1.29
VCPP55072 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.97□□□□□ -1.29
VCPP55072 AC239367.3-201ENST00000428996 814 ntBASIC6.97□□□□□ -1.29
VCPP55072 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.97□□□□□ -1.29
VCPP55072 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.97□□□□□ -1.29
VCPP55072 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.97□□□□□ -1.29
VCPP55072 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.97□□□□□ -1.29
VCPP55072 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VCPP55072 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.97□□□□□ -1.29
VCPP55072 AC093870.1-201ENST00000506837 213 ntBASIC6.97□□□□□ -1.29
VCPP55072 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
VCPP55072 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.97□□□□□ -1.29
VCPP55072 RPL41P2-201ENST00000544920 409 ntBASIC6.97□□□□□ -1.29
VCPP55072 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.97□□□□□ -1.29
VCPP55072 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.97□□□□□ -1.29
VCPP55072 AC018558.5-201ENST00000565840 952 ntBASIC6.97□□□□□ -1.29
VCPP55072 AC067852.5-201ENST00000589299 310 ntBASIC6.97□□□□□ -1.29
VCPP55072 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.97□□□□□ -1.29
VCPP55072 AL683813.2-201ENST00000605245 502 ntBASIC6.97□□□□□ -1.29
VCPP55072 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.97□□□□□ -1.29
VCPP55072 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
VCPP55072 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
VCPP55072 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
VCPP55072 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VCPP55072 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.97□□□□□ -1.29
VCPP55072 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.97□□□□□ -1.29
VCPP55072 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.97□□□□□ -1.29
VCPP55072 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
VCPP55072 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.96□□□□□ -1.29
VCPP55072 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms