Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
APOC4P55056 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
APOC4P55056 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOC4P55056 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
APOC4P55056 LINC01613-201ENST00000561476 2780 ntBASIC4.8□□□□□ -1.64
APOC4P55056 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
APOC4P55056 CASC19-228ENST00000641414 1684 ntBASIC4.8□□□□□ -1.64
APOC4P55056 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
APOC4P55056 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC4.8□□□□□ -1.64
APOC4P55056 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOC4P55056 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
APOC4P55056 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
APOC4P55056 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOC4P55056 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
APOC4P55056 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOC4P55056 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.79□□□□□ -1.64
APOC4P55056 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOC4P55056 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
APOC4P55056 NEK2P4-201ENST00000425793 1329 ntBASIC4.79□□□□□ -1.64
APOC4P55056 AL512310.3-201ENST00000547023 1335 ntBASIC4.79□□□□□ -1.64
APOC4P55056 NAMPTP1-201ENST00000440465 2514 ntBASIC4.79□□□□□ -1.64
APOC4P55056 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOC4P55056 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOC4P55056 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
APOC4P55056 TATDN2P3-201ENST00000452855 3665 ntBASIC4.79□□□□□ -1.64
APOC4P55056 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOC4P55056 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC4.79□□□□□ -1.64
APOC4P55056 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.79□□□□□ -1.64
APOC4P55056 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOC4P55056 RN7SKP187-201ENST00000365536 330 ntBASIC4.79□□□□□ -1.64
APOC4P55056 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOC4P55056 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
APOC4P55056 RPL12P23-201ENST00000405880 490 ntBASIC4.79□□□□□ -1.64
APOC4P55056 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOC4P55056 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC4.79□□□□□ -1.64
APOC4P55056 MRPS21P5-201ENST00000417885 231 ntBASIC4.79□□□□□ -1.64
APOC4P55056 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.79□□□□□ -1.64
APOC4P55056 GTF3AP6-201ENST00000432585 986 ntBASIC4.79□□□□□ -1.64
APOC4P55056 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC4.79□□□□□ -1.64
APOC4P55056 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
APOC4P55056 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.79□□□□□ -1.64
APOC4P55056 AC093166.3-201ENST00000448785 303 ntBASIC4.79□□□□□ -1.64
APOC4P55056 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC4.79□□□□□ -1.64
APOC4P55056 SEPT14P1-201ENST00000458703 648 ntBASIC4.79□□□□□ -1.64
APOC4P55056 MTCO3P42-201ENST00000509488 518 ntBASIC4.79□□□□□ -1.64
APOC4P55056 SETP21-201ENST00000514799 892 ntBASIC4.79□□□□□ -1.64
APOC4P55056 MTCO3P39-201ENST00000514812 518 ntBASIC4.79□□□□□ -1.64
APOC4P55056 RN7SKP5-201ENST00000517045 272 ntBASIC4.79□□□□□ -1.64
APOC4P55056 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
APOC4P55056 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC4.79□□□□□ -1.64
APOC4P55056 LDHC-203ENST00000535809 757 ntTSL 5 BASIC4.79□□□□□ -1.64
APOC4P55056 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.79□□□□□ -1.64
APOC4P55056 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.79□□□□□ -1.64
APOC4P55056 LDHC-205ENST00000537486 583 ntTSL 5 BASIC4.79□□□□□ -1.64
APOC4P55056 AC026956.1-201ENST00000558741 396 ntBASIC4.79□□□□□ -1.64
APOC4P55056 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.79□□□□□ -1.64
APOC4P55056 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.79□□□□□ -1.64
APOC4P55056 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
APOC4P55056 AL359091.2-201ENST00000609303 556 ntBASIC4.79□□□□□ -1.64
APOC4P55056 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.79□□□□□ -1.64
APOC4P55056 AL354718.1-201ENST00000619764 589 ntBASIC4.79□□□□□ -1.64
APOC4P55056 RACK1-235ENST00000626067 564 ntTSL 2 BASIC4.79□□□□□ -1.64
APOC4P55056 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC4.79□□□□□ -1.64
APOC4P55056 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
APOC4P55056 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOC4P55056 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOC4P55056 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOC4P55056 Z93929.1-201ENST00000418200 1475 ntBASIC4.79□□□□□ -1.64
APOC4P55056 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOC4P55056 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOC4P55056 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
APOC4P55056 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.79□□□□□ -1.64
APOC4P55056 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOC4P55056 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOC4P55056 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOC4P55056 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC4.79□□□□□ -1.64
APOC4P55056 ASNSP6-201ENST00000592770 1618 ntBASIC4.79□□□□□ -1.64
APOC4P55056 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOC4P55056 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOC4P55056 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOC4P55056 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
APOC4P55056 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
APOC4P55056 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
APOC4P55056 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
APOC4P55056 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
APOC4P55056 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
APOC4P55056 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
APOC4P55056 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
APOC4P55056 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
APOC4P55056 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
APOC4P55056 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
APOC4P55056 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC4.78□□□□□ -1.64
APOC4P55056 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
APOC4P55056 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
APOC4P55056 AC007485.2-201ENST00000623493 1667 ntBASIC4.78□□□□□ -1.64
APOC4P55056 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
APOC4P55056 MIR621-201ENST00000384919 96 ntBASIC4.78□□□□□ -1.64
APOC4P55056 AL391419.1-201ENST00000398901 1275 ntBASIC4.78□□□□□ -1.64
APOC4P55056 RPL5P20-201ENST00000403848 896 ntBASIC4.78□□□□□ -1.64
APOC4P55056 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms