Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC10.86□□□□□ -0.67
SMARCA4P51532 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC10.86□□□□□ -0.67
SMARCA4P51532 FAM27E4-201ENST00000605259 342 ntBASIC10.86□□□□□ -0.67
SMARCA4P51532 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC10.86□□□□□ -0.67
SMARCA4P51532 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC10.86□□□□□ -0.67
SMARCA4P51532 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMARCA4P51532 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC10.86□□□□□ -0.67
SMARCA4P51532 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC10.86□□□□□ -0.67
SMARCA4P51532 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
SMARCA4P51532 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMARCA4P51532 LINC01963-201ENST00000562038 3148 ntBASIC10.86□□□□□ -0.67
SMARCA4P51532 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMARCA4P51532 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
SMARCA4P51532 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC10.86□□□□□ -0.67
SMARCA4P51532 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
SMARCA4P51532 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC10.86□□□□□ -0.67
SMARCA4P51532 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
SMARCA4P51532 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
SMARCA4P51532 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMARCA4P51532 AC245060.6-201ENST00000624350 8420 ntBASIC10.86□□□□□ -0.67
SMARCA4P51532 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
SMARCA4P51532 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMARCA4P51532 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMARCA4P51532 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMARCA4P51532 CD46-209ENST00000367047 3089 ntTSL 5 BASIC10.85□□□□□ -0.67
SMARCA4P51532 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMARCA4P51532 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC10.85□□□□□ -0.67
SMARCA4P51532 SPRYD7P1-201ENST00000443861 570 ntBASIC10.85□□□□□ -0.67
SMARCA4P51532 OTX2P1-201ENST00000450956 354 ntBASIC10.85□□□□□ -0.67
SMARCA4P51532 RPS27AP3-201ENST00000453803 454 ntBASIC10.85□□□□□ -0.67
SMARCA4P51532 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC10.85□□□□□ -0.67
SMARCA4P51532 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC10.85□□□□□ -0.67
SMARCA4P51532 AC068870.2-201ENST00000620635 389 ntBASIC10.85□□□□□ -0.67
SMARCA4P51532 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC10.85□□□□□ -0.67
SMARCA4P51532 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC10.85□□□□□ -0.67
SMARCA4P51532 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMARCA4P51532 AL049634.1-201ENST00000453770 1720 ntBASIC10.85□□□□□ -0.67
SMARCA4P51532 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMARCA4P51532 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
SMARCA4P51532 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC10.85□□□□□ -0.67
SMARCA4P51532 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SMARCA4P51532 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC10.85□□□□□ -0.67
SMARCA4P51532 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
SMARCA4P51532 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC10.85□□□□□ -0.67
SMARCA4P51532 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SMARCA4P51532 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
SMARCA4P51532 PRICKLE2-204ENST00000564377 8032 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
SMARCA4P51532 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC10.84□□□□□ -0.67
SMARCA4P51532 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
SMARCA4P51532 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
SMARCA4P51532 EEF1A1P29-201ENST00000416082 1096 ntBASIC10.84□□□□□ -0.67
SMARCA4P51532 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC10.84□□□□□ -0.67
SMARCA4P51532 AL139415.1-201ENST00000424862 352 ntBASIC10.84□□□□□ -0.67
SMARCA4P51532 AC005532.2-201ENST00000467154 373 ntBASIC10.84□□□□□ -0.67
SMARCA4P51532 RN7SL57P-201ENST00000493687 290 ntBASIC10.84□□□□□ -0.67
SMARCA4P51532 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC10.84□□□□□ -0.67
SMARCA4P51532 AC008629.2-201ENST00000503783 483 ntBASIC10.84□□□□□ -0.67
SMARCA4P51532 RNU6-615P-201ENST00000516065 106 ntBASIC10.84□□□□□ -0.67
SMARCA4P51532 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC10.84□□□□□ -0.67
SMARCA4P51532 AL049840.6-201ENST00000604583 345 ntBASIC10.84□□□□□ -0.67
SMARCA4P51532 AC105235.1-201ENST00000623208 1816 ntBASIC10.84□□□□□ -0.67
SMARCA4P51532 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
SMARCA4P51532 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC10.84□□□□□ -0.67
SMARCA4P51532 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC10.84□□□□□ -0.67
SMARCA4P51532 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SMARCA4P51532 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMARCA4P51532 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
SMARCA4P51532 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SMARCA4P51532 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC10.84□□□□□ -0.67
SMARCA4P51532 OR6E1P-201ENST00000414424 923 ntBASIC10.84□□□□□ -0.67
SMARCA4P51532 AL390119.1-201ENST00000440329 312 ntBASIC10.84□□□□□ -0.67
SMARCA4P51532 CUBNP2-201ENST00000443534 1139 ntBASIC10.84□□□□□ -0.67
SMARCA4P51532 RN7SL222P-201ENST00000476452 299 ntBASIC10.84□□□□□ -0.67
SMARCA4P51532 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC10.84□□□□□ -0.67
SMARCA4P51532 RNU4ATAC-201ENST00000580972 127 ntBASIC10.84□□□□□ -0.67
SMARCA4P51532 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC10.84□□□□□ -0.67
SMARCA4P51532 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMARCA4P51532 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC10.83□□□□□ -0.67
SMARCA4P51532 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMARCA4P51532 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMARCA4P51532 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC10.83□□□□□ -0.68
SMARCA4P51532 LINC02019-201ENST00000608605 2060 ntBASIC10.83□□□□□ -0.68
SMARCA4P51532 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
SMARCA4P51532 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SMARCA4P51532 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
SMARCA4P51532 AC089998.1-201ENST00000548575 3141 ntBASIC10.83□□□□□ -0.68
SMARCA4P51532 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMARCA4P51532 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SMARCA4P51532 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
SMARCA4P51532 AC113412.1-201ENST00000425840 504 ntBASIC10.83□□□□□ -0.68
SMARCA4P51532 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC10.83□□□□□ -0.68
SMARCA4P51532 GAPDHP58-201ENST00000438477 1006 ntBASIC10.83□□□□□ -0.68
SMARCA4P51532 CNOT7P2-201ENST00000441051 832 ntBASIC10.83□□□□□ -0.68
SMARCA4P51532 GAPDHP71-201ENST00000511530 1003 ntBASIC10.83□□□□□ -0.68
SMARCA4P51532 RNA5SP400-201ENST00000517155 111 ntBASIC10.83□□□□□ -0.68
SMARCA4P51532 IGLV2-28-201ENST00000520681 304 ntBASIC10.83□□□□□ -0.68
SMARCA4P51532 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC10.83□□□□□ -0.68
SMARCA4P51532 AL445649.1-201ENST00000615941 691 ntBASIC10.83□□□□□ -0.68
SMARCA4P51532 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMARCA4P51532 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms