Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC022726.2-201ENST00000634673 547 ntBASIC6.1□□□□□ -1.43
PTPN6P29350 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.1□□□□□ -1.43
PTPN6P29350 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTPN6P29350 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.1□□□□□ -1.43
PTPN6P29350 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTPN6P29350 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.1□□□□□ -1.43
PTPN6P29350 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTPN6P29350 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PTPN6P29350 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PTPN6P29350 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTPN6P29350 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTPN6P29350 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
PTPN6P29350 AC073365.1-203ENST00000641055 1992 ntBASIC6.09□□□□□ -1.43
PTPN6P29350 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTPN6P29350 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.09□□□□□ -1.43
PTPN6P29350 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTPN6P29350 RBPJP6-201ENST00000411556 1431 ntBASIC6.09□□□□□ -1.43
PTPN6P29350 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.09□□□□□ -1.43
PTPN6P29350 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.09□□□□□ -1.43
PTPN6P29350 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
PTPN6P29350 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.09□□□□□ -1.43
PTPN6P29350 PPIAP24-201ENST00000328558 471 ntBASIC6.09□□□□□ -1.43
PTPN6P29350 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.09□□□□□ -1.43
PTPN6P29350 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.09□□□□□ -1.43
PTPN6P29350 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTPN6P29350 RPL12P23-201ENST00000405880 490 ntBASIC6.09□□□□□ -1.43
PTPN6P29350 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.09□□□□□ -1.43
PTPN6P29350 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.09□□□□□ -1.43
PTPN6P29350 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
PTPN6P29350 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.09□□□□□ -1.43
PTPN6P29350 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.09□□□□□ -1.43
PTPN6P29350 AL022237.1-201ENST00000446663 358 ntBASIC6.09□□□□□ -1.43
PTPN6P29350 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTPN6P29350 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTPN6P29350 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.09□□□□□ -1.43
PTPN6P29350 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.09□□□□□ -1.43
PTPN6P29350 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.09□□□□□ -1.43
PTPN6P29350 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTPN6P29350 AC026956.1-201ENST00000558741 396 ntBASIC6.09□□□□□ -1.43
PTPN6P29350 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.09□□□□□ -1.43
PTPN6P29350 AL390877.1-201ENST00000605704 214 ntBASIC6.09□□□□□ -1.43
PTPN6P29350 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.09□□□□□ -1.43
PTPN6P29350 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.09□□□□□ -1.43
PTPN6P29350 MIR6503-201ENST00000622884 86 ntBASIC6.09□□□□□ -1.43
PTPN6P29350 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.09□□□□□ -1.43
PTPN6P29350 AL132640.3-201ENST00000630473 177 ntBASIC6.09□□□□□ -1.43
PTPN6P29350 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.09□□□□□ -1.43
PTPN6P29350 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTPN6P29350 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTPN6P29350 AC130360.2-201ENST00000533477 1556 ntBASIC6.09□□□□□ -1.43
PTPN6P29350 MAPK10-261ENST00000641050 3109 ntBASIC6.09□□□□□ -1.43
PTPN6P29350 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.09□□□□□ -1.44
PTPN6P29350 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
PTPN6P29350 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PTPN6P29350 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PTPN6P29350 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
PTPN6P29350 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PTPN6P29350 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
PTPN6P29350 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.08□□□□□ -1.44
PTPN6P29350 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTPN6P29350 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTPN6P29350 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
PTPN6P29350 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTPN6P29350 CDY11P-201ENST00000447168 1651 ntBASIC6.08□□□□□ -1.44
PTPN6P29350 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.08□□□□□ -1.44
PTPN6P29350 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTPN6P29350 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
PTPN6P29350 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.08□□□□□ -1.44
PTPN6P29350 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTPN6P29350 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PTPN6P29350 SAGE3P-201ENST00000619800 1635 ntBASIC6.08□□□□□ -1.44
PTPN6P29350 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.08□□□□□ -1.44
PTPN6P29350 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTPN6P29350 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTPN6P29350 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTPN6P29350 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PTPN6P29350 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTPN6P29350 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTPN6P29350 RNA5SP140-201ENST00000364524 92 ntBASIC6.08□□□□□ -1.44
PTPN6P29350 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTPN6P29350 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTPN6P29350 Z82198.3-201ENST00000421145 199 ntBASIC6.08□□□□□ -1.44
PTPN6P29350 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.08□□□□□ -1.44
PTPN6P29350 AL031681.1-201ENST00000443304 400 ntBASIC6.08□□□□□ -1.44
PTPN6P29350 VN1R38P-201ENST00000450265 887 ntBASIC6.08□□□□□ -1.44
PTPN6P29350 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.08□□□□□ -1.44
PTPN6P29350 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.08□□□□□ -1.44
PTPN6P29350 AC103563.5-201ENST00000455643 364 ntBASIC6.08□□□□□ -1.44
PTPN6P29350 RN7SL393P-201ENST00000463588 296 ntBASIC6.08□□□□□ -1.44
PTPN6P29350 AC111000.5-201ENST00000506559 1178 ntBASIC6.08□□□□□ -1.44
PTPN6P29350 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.08□□□□□ -1.44
PTPN6P29350 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.08□□□□□ -1.44
PTPN6P29350 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.08□□□□□ -1.44
PTPN6P29350 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTPN6P29350 OR9G2P-201ENST00000533326 880 ntBASIC6.08□□□□□ -1.44
PTPN6P29350 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.08□□□□□ -1.44
PTPN6P29350 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.08□□□□□ -1.44
PTPN6P29350 BMS1P16-201ENST00000556075 1147 ntBASIC6.08□□□□□ -1.44
PTPN6P29350 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.08□□□□□ -1.44
PTPN6P29350 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms