Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 OR7A2P-201ENST00000304105 930 ntBASIC4.87□□□□□ -1.63
HLA-DMBP28068 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DMBP28068 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 TINAG-202ENST00000370864 692 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DMBP28068 SNORA7A-201ENST00000384765 139 ntBASIC4.87□□□□□ -1.63
HLA-DMBP28068 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 AC116036.1-201ENST00000412199 367 ntBASIC4.87□□□□□ -1.63
HLA-DMBP28068 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 Z82198.3-201ENST00000421145 199 ntBASIC4.87□□□□□ -1.63
HLA-DMBP28068 AC003989.1-201ENST00000434569 565 ntBASIC4.87□□□□□ -1.63
HLA-DMBP28068 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 NPM1P23-201ENST00000440193 849 ntBASIC4.87□□□□□ -1.63
HLA-DMBP28068 RPL12P49-201ENST00000441100 121 ntBASIC4.87□□□□□ -1.63
HLA-DMBP28068 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 AL031681.1-201ENST00000443304 400 ntBASIC4.87□□□□□ -1.63
HLA-DMBP28068 REG1CP-206ENST00000447469 496 ntBASIC4.87□□□□□ -1.63
HLA-DMBP28068 AC092967.1-201ENST00000449016 481 ntBASIC4.87□□□□□ -1.63
HLA-DMBP28068 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 RPL9P15-201ENST00000491096 532 ntBASIC4.87□□□□□ -1.63
HLA-DMBP28068 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 HNRNPA1P74-201ENST00000560782 835 ntBASIC4.87□□□□□ -1.63
HLA-DMBP28068 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 AC233702.7-202ENST00000582941 211 ntBASIC4.87□□□□□ -1.63
HLA-DMBP28068 RPL7AP69-201ENST00000595306 806 ntBASIC4.87□□□□□ -1.63
HLA-DMBP28068 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 AC093635.1-201ENST00000609028 555 ntBASIC4.87□□□□□ -1.63
HLA-DMBP28068 IGKV2OR2-10-201ENST00000613976 311 ntBASIC4.87□□□□□ -1.63
HLA-DMBP28068 MIR6503-201ENST00000622884 86 ntBASIC4.87□□□□□ -1.63
HLA-DMBP28068 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 EEF1A1P12-201ENST00000443590 1346 ntBASIC4.87□□□□□ -1.63
HLA-DMBP28068 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DMBP28068 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DMBP28068 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DMBP28068 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DMBP28068 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DMBP28068 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DMBP28068 ZNF969P-201ENST00000510345 2341 ntBASIC4.86□□□□□ -1.63
HLA-DMBP28068 HSPD1P8-201ENST00000400121 1658 ntBASIC4.86□□□□□ -1.63
HLA-DMBP28068 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DMBP28068 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HLA-DMBP28068 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DMBP28068 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HLA-DMBP28068 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
HLA-DMBP28068 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DMBP28068 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HLA-DMBP28068 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DMBP28068 AC019178.1-201ENST00000392337 440 ntBASIC4.86□□□□□ -1.63
HLA-DMBP28068 AC026310.1-201ENST00000396004 378 ntBASIC4.86□□□□□ -1.63
HLA-DMBP28068 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.86□□□□□ -1.63
HLA-DMBP28068 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DMBP28068 RANP6-201ENST00000413691 644 ntBASIC4.86□□□□□ -1.63
HLA-DMBP28068 AL359092.1-201ENST00000417156 265 ntBASIC4.86□□□□□ -1.63
HLA-DMBP28068 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DMBP28068 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DMBP28068 CDC42P6-201ENST00000421246 576 ntBASIC4.86□□□□□ -1.63
HLA-DMBP28068 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HLA-DMBP28068 RPL23AP85-201ENST00000421838 433 ntBASIC4.86□□□□□ -1.63
HLA-DMBP28068 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DMBP28068 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DMBP28068 AC096632.2-201ENST00000438139 1239 ntBASIC4.86□□□□□ -1.63
HLA-DMBP28068 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DMBP28068 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DMBP28068 AL445991.1-201ENST00000450381 475 ntBASIC4.86□□□□□ -1.63
HLA-DMBP28068 AC092349.1-201ENST00000504903 310 ntBASIC4.86□□□□□ -1.63
HLA-DMBP28068 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC4.86□□□□□ -1.63
HLA-DMBP28068 NACAP5-201ENST00000509863 636 ntBASIC4.86□□□□□ -1.63
HLA-DMBP28068 SCARNA5-201ENST00000516201 276 ntBASIC4.86□□□□□ -1.63
HLA-DMBP28068 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DMBP28068 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC4.86□□□□□ -1.63
HLA-DMBP28068 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DMBP28068 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DMBP28068 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DMBP28068 AC084851.2-201ENST00000530377 364 ntBASIC4.86□□□□□ -1.63
HLA-DMBP28068 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DMBP28068 AC090115.2-201ENST00000548060 883 ntBASIC4.86□□□□□ -1.63
HLA-DMBP28068 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DMBP28068 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC4.86□□□□□ -1.63
HLA-DMBP28068 HNRNPA3P9-201ENST00000604913 979 ntBASIC4.86□□□□□ -1.63
HLA-DMBP28068 AC005514.1-201ENST00000623521 208 ntBASIC4.86□□□□□ -1.63
HLA-DMBP28068 AP001153.1-201ENST00000641024 338 ntBASIC4.86□□□□□ -1.63
HLA-DMBP28068 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DMBP28068 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms