Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
CDH3P22223 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CDH3P22223 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH3P22223 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
CDH3P22223 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDH3P22223 AC027575.3-201ENST00000583058 2747 ntBASIC6.38□□□□□ -1.39
CDH3P22223 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDH3P22223 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CDH3P22223 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CDH3P22223 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CDH3P22223 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDH3P22223 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.38□□□□□ -1.39
CDH3P22223 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDH3P22223 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDH3P22223 RN7SKP188-201ENST00000410789 317 ntBASIC6.38□□□□□ -1.39
CDH3P22223 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.38□□□□□ -1.39
CDH3P22223 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.38□□□□□ -1.39
CDH3P22223 OR6R1P-201ENST00000431838 940 ntBASIC6.38□□□□□ -1.39
CDH3P22223 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.38□□□□□ -1.39
CDH3P22223 COL11A2P1-205ENST00000441798 676 ntBASIC6.38□□□□□ -1.39
CDH3P22223 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.38□□□□□ -1.39
CDH3P22223 AC005165.2-201ENST00000466070 380 ntBASIC6.38□□□□□ -1.39
CDH3P22223 RPL29P23-201ENST00000486188 442 ntBASIC6.38□□□□□ -1.39
CDH3P22223 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CDH3P22223 AC111000.5-201ENST00000506559 1178 ntBASIC6.38□□□□□ -1.39
CDH3P22223 AC093870.1-201ENST00000506837 213 ntBASIC6.38□□□□□ -1.39
CDH3P22223 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.38□□□□□ -1.39
CDH3P22223 AP001804.1-201ENST00000526868 919 ntBASIC6.38□□□□□ -1.39
CDH3P22223 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.38□□□□□ -1.39
CDH3P22223 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.38□□□□□ -1.39
CDH3P22223 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.38□□□□□ -1.39
CDH3P22223 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.38□□□□□ -1.39
CDH3P22223 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.38□□□□□ -1.39
CDH3P22223 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.38□□□□□ -1.39
CDH3P22223 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.38□□□□□ -1.39
CDH3P22223 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.38□□□□□ -1.39
CDH3P22223 AC092718.4-201ENST00000566639 716 ntBASIC6.38□□□□□ -1.39
CDH3P22223 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDH3P22223 NDUFB9P1-201ENST00000604683 510 ntBASIC6.38□□□□□ -1.39
CDH3P22223 AC114477.1-201ENST00000605097 605 ntBASIC6.38□□□□□ -1.39
CDH3P22223 MIR6823-201ENST00000622118 61 ntBASIC6.38□□□□□ -1.39
CDH3P22223 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.38□□□□□ -1.39
CDH3P22223 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CDH3P22223 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.38□□□□□ -1.39
CDH3P22223 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDH3P22223 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.38□□□□□ -1.39
CDH3P22223 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CDH3P22223 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
CDH3P22223 ICE2P1-201ENST00000512800 1849 ntBASIC6.38□□□□□ -1.39
CDH3P22223 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CDH3P22223 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.38□□□□□ -1.39
CDH3P22223 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDH3P22223 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.38□□□□□ -1.39
CDH3P22223 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDH3P22223 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH3P22223 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CDH3P22223 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH3P22223 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.37□□□□□ -1.39
CDH3P22223 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH3P22223 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH3P22223 AC013488.1-201ENST00000526618 1838 ntBASIC6.37□□□□□ -1.39
CDH3P22223 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CDH3P22223 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
CDH3P22223 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CDH3P22223 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.37□□□□□ -1.39
CDH3P22223 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CDH3P22223 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.37□□□□□ -1.39
CDH3P22223 SYT14P1-202ENST00000600441 1448 ntBASIC6.37□□□□□ -1.39
CDH3P22223 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CDH3P22223 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.37□□□□□ -1.39
CDH3P22223 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CDH3P22223 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CDH3P22223 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CDH3P22223 AL133260.1-201ENST00000405720 405 ntBASIC6.37□□□□□ -1.39
CDH3P22223 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.37□□□□□ -1.39
CDH3P22223 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CDH3P22223 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.37□□□□□ -1.39
CDH3P22223 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.37□□□□□ -1.39
CDH3P22223 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CDH3P22223 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.37□□□□□ -1.39
CDH3P22223 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.37□□□□□ -1.39
CDH3P22223 IGKV2-19-201ENST00000518132 283 ntBASIC6.37□□□□□ -1.39
CDH3P22223 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.37□□□□□ -1.39
CDH3P22223 AP000662.1-201ENST00000530952 487 ntBASIC6.37□□□□□ -1.39
CDH3P22223 AC023310.2-201ENST00000553844 547 ntBASIC6.37□□□□□ -1.39
CDH3P22223 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.37□□□□□ -1.39
CDH3P22223 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.37□□□□□ -1.39
CDH3P22223 AP003115.1-201ENST00000569849 463 ntBASIC6.37□□□□□ -1.39
CDH3P22223 AC025283.1-201ENST00000572039 734 ntBASIC6.37□□□□□ -1.39
CDH3P22223 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.37□□□□□ -1.39
CDH3P22223 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.37□□□□□ -1.39
CDH3P22223 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.37□□□□□ -1.39
CDH3P22223 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.37□□□□□ -1.39
CDH3P22223 AC091193.1-201ENST00000604640 448 ntBASIC6.37□□□□□ -1.39
CDH3P22223 RPL12P48-201ENST00000605620 304 ntBASIC6.37□□□□□ -1.39
CDH3P22223 AC004241.2-201ENST00000614562 444 ntBASIC6.37□□□□□ -1.39
CDH3P22223 AL354718.1-201ENST00000619764 589 ntBASIC6.37□□□□□ -1.39
CDH3P22223 AC018628.1-201ENST00000624147 3819 ntBASIC6.37□□□□□ -1.39
CDH3P22223 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.37□□□□□ -1.39
CDH3P22223 AP001153.1-201ENST00000641024 338 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms