Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC9.63□□□□□ -0.87
MS4A1P11836 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
MS4A1P11836 AC084033.2-201ENST00000551532 967 ntBASIC9.63□□□□□ -0.87
MS4A1P11836 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC9.63□□□□□ -0.87
MS4A1P11836 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC9.63□□□□□ -0.87
MS4A1P11836 NBEAP1-201ENST00000554452 979 ntBASIC9.63□□□□□ -0.87
MS4A1P11836 LINC01588-213ENST00000557142 492 ntTSL 3 BASIC9.63□□□□□ -0.87
MS4A1P11836 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC9.63□□□□□ -0.87
MS4A1P11836 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
MS4A1P11836 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC9.63□□□□□ -0.87
MS4A1P11836 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC9.63□□□□□ -0.87
MS4A1P11836 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC9.63□□□□□ -0.87
MS4A1P11836 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC9.63□□□□□ -0.87
MS4A1P11836 AC005021.1-201ENST00000608730 355 ntBASIC9.63□□□□□ -0.87
MS4A1P11836 AC009237.15-201ENST00000610252 501 ntBASIC9.63□□□□□ -0.87
MS4A1P11836 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC9.63□□□□□ -0.87
MS4A1P11836 MIAT_exon1.1-201ENST00000617016 135 ntBASIC9.63□□□□□ -0.87
MS4A1P11836 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
MS4A1P11836 RPL36AP21-202ENST00000639134 430 ntBASIC9.63□□□□□ -0.87
MS4A1P11836 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
MS4A1P11836 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
MS4A1P11836 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
MS4A1P11836 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC9.63□□□□□ -0.87
MS4A1P11836 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
MS4A1P11836 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
MS4A1P11836 EEF1A1P4-201ENST00000359165 1405 ntBASIC9.63□□□□□ -0.87
MS4A1P11836 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
MS4A1P11836 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
MS4A1P11836 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
MS4A1P11836 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
MS4A1P11836 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC9.63□□□□□ -0.87
MS4A1P11836 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
MS4A1P11836 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
MS4A1P11836 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC9.63□□□□□ -0.87
MS4A1P11836 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
MS4A1P11836 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
MS4A1P11836 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MS4A1P11836 AC012020.1-201ENST00000624541 1728 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MS4A1P11836 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC9.62□□□□□ -0.87
MS4A1P11836 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
MS4A1P11836 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
MS4A1P11836 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
MS4A1P11836 NXF4-202ENST00000416098 1465 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
MS4A1P11836 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
MS4A1P11836 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
MS4A1P11836 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
MS4A1P11836 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
MS4A1P11836 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
MS4A1P11836 TMEM199-202ENST00000395404 971 ntTSL 5 BASIC9.62□□□□□ -0.87
MS4A1P11836 NUS1P4-201ENST00000401550 585 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 ZNF603P-201ENST00000405613 487 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 RN7SKP166-201ENST00000410812 305 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 XKRYP4-201ENST00000414395 483 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 BTF3P8-201ENST00000414577 526 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC9.62□□□□□ -0.87
MS4A1P11836 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC9.62□□□□□ -0.87
MS4A1P11836 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC9.62□□□□□ -0.87
MS4A1P11836 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC9.62□□□□□ -0.87
MS4A1P11836 DDX11L10-201ENST00000430178 571 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 KRT18P53-201ENST00000431919 117 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC9.62□□□□□ -0.87
MS4A1P11836 RAB9AP5-201ENST00000437794 597 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 RAB9AP2-201ENST00000443911 597 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC9.62□□□□□ -0.87
MS4A1P11836 UBE2V1P7-201ENST00000446395 340 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 XKRYP5-201ENST00000449659 483 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 NPM1P9-201ENST00000453156 844 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 RN7SL685P-201ENST00000476271 298 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC9.62□□□□□ -0.87
MS4A1P11836 AC092045.1-201ENST00000495716 1231 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 RN7SL124P-201ENST00000498656 285 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 AC114300.1-201ENST00000502347 280 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC9.62□□□□□ -0.87
MS4A1P11836 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC9.62□□□□□ -0.87
MS4A1P11836 HIGD1AP18-201ENST00000520730 278 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC9.62□□□□□ -0.87
MS4A1P11836 CRADD-210ENST00000552033 622 ntTSL 3 BASIC9.62□□□□□ -0.87
MS4A1P11836 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC9.62□□□□□ -0.87
MS4A1P11836 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC9.62□□□□□ -0.87
MS4A1P11836 BMS1P8-201ENST00000565049 1178 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 NDUFA5P11-201ENST00000567995 343 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 AC090415.1-201ENST00000581877 847 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
MS4A1P11836 AC025449.1-201ENST00000603896 529 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 AL031281.1-201ENST00000604049 488 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 AL136363.2-201ENST00000604173 851 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MS4A1P11836 PFN1P2-202ENST00000621347 397 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 AC012100.3-201ENST00000624738 575 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC9.62□□□□□ -0.87
MS4A1P11836 AC068137.3-201ENST00000639191 341 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC9.62□□□□□ -0.87
MS4A1P11836 AC073869.6-201ENST00000640656 341 ntBASIC9.62□□□□□ -0.87
MS4A1P11836 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
MS4A1P11836 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
MS4A1P11836 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MS4A1P11836 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC9.62□□□□□ -0.87
MS4A1P11836 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms