Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 OR7E91P-202ENST00000642062 1198 ntBASIC6.93□□□□□ -1.3
TPM1P09493 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.93□□□□□ -1.3
TPM1P09493 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TPM1P09493 AL161912.4-201ENST00000623889 2468 ntBASIC6.93□□□□□ -1.3
TPM1P09493 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
TPM1P09493 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.93□□□□□ -1.3
TPM1P09493 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TPM1P09493 AL355488.2-201ENST00000609909 2850 ntBASIC6.93□□□□□ -1.3
TPM1P09493 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
TPM1P09493 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TPM1P09493 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TPM1P09493 AL049634.1-201ENST00000453770 1720 ntBASIC6.93□□□□□ -1.3
TPM1P09493 AC139426.3-201ENST00000605648 2059 ntBASIC6.92□□□□□ -1.3
TPM1P09493 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TPM1P09493 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.92□□□□□ -1.3
TPM1P09493 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.92□□□□□ -1.3
TPM1P09493 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TPM1P09493 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
TPM1P09493 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
TPM1P09493 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
TPM1P09493 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.92□□□□□ -1.3
TPM1P09493 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.92□□□□□ -1.3
TPM1P09493 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.92□□□□□ -1.3
TPM1P09493 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.92□□□□□ -1.3
TPM1P09493 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
TPM1P09493 SNORD16-201ENST00000362803 99 ntBASIC6.92□□□□□ -1.3
TPM1P09493 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
TPM1P09493 MIR1231-201ENST00000408101 92 ntBASIC6.92□□□□□ -1.3
TPM1P09493 RN7SKP129-201ENST00000410288 299 ntBASIC6.92□□□□□ -1.3
TPM1P09493 MRPS21P2-201ENST00000424704 264 ntBASIC6.92□□□□□ -1.3
TPM1P09493 AHCYP8-201ENST00000425108 209 ntBASIC6.92□□□□□ -1.3
TPM1P09493 AL596268.1-201ENST00000427910 1048 ntBASIC6.92□□□□□ -1.3
TPM1P09493 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.92□□□□□ -1.3
TPM1P09493 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.92□□□□□ -1.3
TPM1P09493 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.92□□□□□ -1.3
TPM1P09493 RPL5P10-201ENST00000445207 894 ntBASIC6.92□□□□□ -1.3
TPM1P09493 PCMTD1P3-201ENST00000451824 472 ntBASIC6.92□□□□□ -1.3
TPM1P09493 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.92□□□□□ -1.3
TPM1P09493 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.92□□□□□ -1.3
TPM1P09493 NF1P12-201ENST00000549593 583 ntBASIC6.92□□□□□ -1.3
TPM1P09493 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.92□□□□□ -1.3
TPM1P09493 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.92□□□□□ -1.3
TPM1P09493 DPPA3P2-202ENST00000557188 1219 ntBASIC6.92□□□□□ -1.3
TPM1P09493 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC6.92□□□□□ -1.3
TPM1P09493 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.92□□□□□ -1.3
TPM1P09493 AC091932.1-201ENST00000569381 427 ntBASIC6.92□□□□□ -1.3
TPM1P09493 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.92□□□□□ -1.3
TPM1P09493 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.92□□□□□ -1.3
TPM1P09493 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.92□□□□□ -1.3
TPM1P09493 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.92□□□□□ -1.3
TPM1P09493 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.92□□□□□ -1.3
TPM1P09493 SNORD96A-201ENST00000606577 79 ntBASIC6.92□□□□□ -1.3
TPM1P09493 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.92□□□□□ -1.3
TPM1P09493 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TPM1P09493 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.92□□□□□ -1.3
TPM1P09493 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TPM1P09493 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TPM1P09493 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TPM1P09493 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TPM1P09493 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
TPM1P09493 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TPM1P09493 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
TPM1P09493 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.91□□□□□ -1.3
TPM1P09493 AC126474.2-201ENST00000623268 1750 ntBASIC6.91□□□□□ -1.3
TPM1P09493 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TPM1P09493 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
TPM1P09493 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TPM1P09493 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.91□□□□□ -1.3
TPM1P09493 AL157884.1-201ENST00000424561 454 ntBASIC6.91□□□□□ -1.3
TPM1P09493 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.91□□□□□ -1.3
TPM1P09493 AL590399.2-201ENST00000427536 309 ntBASIC6.91□□□□□ -1.3
TPM1P09493 CHCHD4P5-201ENST00000436684 427 ntBASIC6.91□□□□□ -1.3
TPM1P09493 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.91□□□□□ -1.3
TPM1P09493 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
TPM1P09493 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.91□□□□□ -1.3
TPM1P09493 AC108751.3-201ENST00000461814 1020 ntBASIC6.91□□□□□ -1.3
TPM1P09493 CBX5P1-201ENST00000468470 561 ntBASIC6.91□□□□□ -1.3
TPM1P09493 RPL7AP30-201ENST00000482859 796 ntBASIC6.91□□□□□ -1.3
TPM1P09493 AC010343.2-201ENST00000510162 224 ntBASIC6.91□□□□□ -1.3
TPM1P09493 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.91□□□□□ -1.3
TPM1P09493 AC008429.4-201ENST00000521201 182 ntBASIC6.91□□□□□ -1.3
TPM1P09493 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.91□□□□□ -1.3
TPM1P09493 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.91□□□□□ -1.3
TPM1P09493 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC6.91□□□□□ -1.3
TPM1P09493 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.91□□□□□ -1.3
TPM1P09493 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.91□□□□□ -1.3
TPM1P09493 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.91□□□□□ -1.3
TPM1P09493 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.91□□□□□ -1.3
TPM1P09493 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.91□□□□□ -1.3
TPM1P09493 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.91□□□□□ -1.3
TPM1P09493 AC003992.1-201ENST00000635364 557 ntBASIC6.91□□□□□ -1.3
TPM1P09493 AC000095.2-202ENST00000637415 154 ntBASIC6.91□□□□□ -1.3
TPM1P09493 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TPM1P09493 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
TPM1P09493 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.91□□□□□ -1.3
TPM1P09493 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
TPM1P09493 GUCY1B2-204ENST00000531898 1979 ntBASIC6.91□□□□□ -1.3
TPM1P09493 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TPM1P09493 AL049869.1-201ENST00000556933 1402 ntBASIC6.91□□□□□ -1.3
TPM1P09493 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms