Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL589826.1-201ENST00000340697 249 ntBASIC7.54□□□□□ -1.2
HLA-DOAP06340 RNA5SP188-201ENST00000362916 129 ntBASIC7.54□□□□□ -1.2
HLA-DOAP06340 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
HLA-DOAP06340 SNORA77.2-201ENST00000408571 112 ntBASIC7.54□□□□□ -1.2
HLA-DOAP06340 RN7SKP144-201ENST00000411108 279 ntBASIC7.54□□□□□ -1.2
HLA-DOAP06340 RN7SKP108-201ENST00000411367 328 ntBASIC7.54□□□□□ -1.2
HLA-DOAP06340 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HLA-DOAP06340 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC7.54□□□□□ -1.2
HLA-DOAP06340 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
HLA-DOAP06340 AC144530.1-201ENST00000452862 555 ntBASIC7.54□□□□□ -1.2
HLA-DOAP06340 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.54□□□□□ -1.2
HLA-DOAP06340 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.54□□□□□ -1.2
HLA-DOAP06340 NATP-201ENST00000523491 878 ntBASIC7.54□□□□□ -1.2
HLA-DOAP06340 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.54□□□□□ -1.2
HLA-DOAP06340 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.54□□□□□ -1.2
HLA-DOAP06340 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.54□□□□□ -1.2
HLA-DOAP06340 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.54□□□□□ -1.2
HLA-DOAP06340 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC7.54□□□□□ -1.2
HLA-DOAP06340 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.54□□□□□ -1.2
HLA-DOAP06340 MRPS21P8-201ENST00000569196 235 ntBASIC7.54□□□□□ -1.2
HLA-DOAP06340 AP005136.2-201ENST00000583253 1049 ntBASIC7.54□□□□□ -1.2
HLA-DOAP06340 BNIP3P39-201ENST00000601077 554 ntBASIC7.54□□□□□ -1.2
HLA-DOAP06340 AP001437.1-201ENST00000608783 456 ntBASIC7.54□□□□□ -1.2
HLA-DOAP06340 AL080312.2-201ENST00000613001 630 ntBASIC7.54□□□□□ -1.2
HLA-DOAP06340 AC010809.3-201ENST00000621310 641 ntBASIC7.54□□□□□ -1.2
HLA-DOAP06340 AL359742.1-201ENST00000622497 540 ntBASIC7.54□□□□□ -1.2
HLA-DOAP06340 AC022400.9-201ENST00000623633 273 ntBASIC7.54□□□□□ -1.2
HLA-DOAP06340 AC080188.3-201ENST00000624842 748 ntBASIC7.54□□□□□ -1.2
HLA-DOAP06340 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC7.54□□□□□ -1.2
HLA-DOAP06340 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
HLA-DOAP06340 AL117339.4-201ENST00000608335 7063 ntBASIC7.54□□□□□ -1.2
HLA-DOAP06340 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC7.54□□□□□ -1.2
HLA-DOAP06340 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.54□□□□□ -1.2
HLA-DOAP06340 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.54□□□□□ -1.2
HLA-DOAP06340 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
HLA-DOAP06340 NEK2P2-201ENST00000438441 1338 ntBASIC7.53□□□□□ -1.2
HLA-DOAP06340 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
HLA-DOAP06340 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 AC027575.3-201ENST00000583058 2747 ntBASIC7.53□□□□□ -1.2
HLA-DOAP06340 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HLA-DOAP06340 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
HLA-DOAP06340 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 COX6B1P3-201ENST00000312310 260 ntBASIC7.53□□□□□ -1.2
HLA-DOAP06340 AL050335.1-201ENST00000396909 869 ntBASIC7.53□□□□□ -1.2
HLA-DOAP06340 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
HLA-DOAP06340 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 RPL6P30-201ENST00000443382 862 ntBASIC7.53□□□□□ -1.2
HLA-DOAP06340 AL133351.3-201ENST00000454998 193 ntBASIC7.53□□□□□ -1.2
HLA-DOAP06340 AC068228.1-201ENST00000461723 211 ntBASIC7.53□□□□□ -1.2
HLA-DOAP06340 NDUFA5P5-201ENST00000468361 342 ntBASIC7.53□□□□□ -1.2
HLA-DOAP06340 RN7SL326P-201ENST00000477493 296 ntBASIC7.53□□□□□ -1.2
HLA-DOAP06340 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 AC090115.2-201ENST00000548060 883 ntBASIC7.53□□□□□ -1.2
HLA-DOAP06340 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 AL136097.3-201ENST00000611097 505 ntBASIC7.53□□□□□ -1.2
HLA-DOAP06340 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HLA-DOAP06340 FAM27E2-201ENST00000619668 403 ntBASIC7.53□□□□□ -1.2
HLA-DOAP06340 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 AL590396.2-201ENST00000636511 1041 ntBASIC7.53□□□□□ -1.2
HLA-DOAP06340 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
HLA-DOAP06340 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
HLA-DOAP06340 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HLA-DOAP06340 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.53□□□□□ -1.2
HLA-DOAP06340 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
HLA-DOAP06340 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.52□□□□□ -1.2
HLA-DOAP06340 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
HLA-DOAP06340 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.2
HLA-DOAP06340 HSPD1P9-201ENST00000420325 1636 ntBASIC7.52□□□□□ -1.2
HLA-DOAP06340 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-DOAP06340 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-DOAP06340 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-DOAP06340 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-DOAP06340 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-DOAP06340 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-DOAP06340 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
HLA-DOAP06340 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
HLA-DOAP06340 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-DOAP06340 RNA5SP346-201ENST00000363541 121 ntBASIC7.52□□□□□ -1.21
HLA-DOAP06340 RNU1-24P-201ENST00000364285 165 ntBASIC7.52□□□□□ -1.21
HLA-DOAP06340 RN7SKP15-201ENST00000364742 309 ntBASIC7.52□□□□□ -1.21
HLA-DOAP06340 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.52□□□□□ -1.21
HLA-DOAP06340 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.52□□□□□ -1.21
HLA-DOAP06340 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
HLA-DOAP06340 AC097523.2-201ENST00000435551 652 ntBASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms