Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHRNA1P02708 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHRNA1P02708 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHRNA1P02708 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.94□□□□□ -1.3
CHRNA1P02708 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CHRNA1P02708 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CHRNA1P02708 BRD7P6-201ENST00000431406 1860 ntBASIC6.94□□□□□ -1.3
CHRNA1P02708 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHRNA1P02708 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHRNA1P02708 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
CHRNA1P02708 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHRNA1P02708 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.93□□□□□ -1.3
CHRNA1P02708 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
CHRNA1P02708 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.93□□□□□ -1.3
CHRNA1P02708 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.93□□□□□ -1.3
CHRNA1P02708 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.93□□□□□ -1.3
CHRNA1P02708 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHRNA1P02708 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.93□□□□□ -1.3
CHRNA1P02708 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.93□□□□□ -1.3
CHRNA1P02708 MROH3P-201ENST00000435735 2676 ntBASIC6.93□□□□□ -1.3
CHRNA1P02708 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHRNA1P02708 OR7E25P-201ENST00000344844 931 ntBASIC6.93□□□□□ -1.3
CHRNA1P02708 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHRNA1P02708 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.93□□□□□ -1.3
CHRNA1P02708 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.93□□□□□ -1.3
CHRNA1P02708 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.93□□□□□ -1.3
CHRNA1P02708 AL139415.1-201ENST00000424862 352 ntBASIC6.93□□□□□ -1.3
CHRNA1P02708 CDY8P-201ENST00000428380 1279 ntBASIC6.93□□□□□ -1.3
CHRNA1P02708 HSPE1P27-201ENST00000430808 296 ntBASIC6.93□□□□□ -1.3
CHRNA1P02708 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.93□□□□□ -1.3
CHRNA1P02708 CDY20P-201ENST00000447528 1279 ntBASIC6.93□□□□□ -1.3
CHRNA1P02708 HLA-DPA3-207ENST00000454398 229 ntBASIC6.93□□□□□ -1.3
CHRNA1P02708 SETP20-201ENST00000457046 852 ntBASIC6.93□□□□□ -1.3
CHRNA1P02708 AC098847.1-201ENST00000473094 348 ntBASIC6.93□□□□□ -1.3
CHRNA1P02708 RPL7P51-201ENST00000490532 749 ntBASIC6.93□□□□□ -1.3
CHRNA1P02708 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.93□□□□□ -1.3
CHRNA1P02708 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.93□□□□□ -1.3
CHRNA1P02708 RN7SKP238-201ENST00000516483 249 ntBASIC6.93□□□□□ -1.3
CHRNA1P02708 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.93□□□□□ -1.3
CHRNA1P02708 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.93□□□□□ -1.3
CHRNA1P02708 AL359704.2-201ENST00000604335 521 ntBASIC6.93□□□□□ -1.3
CHRNA1P02708 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.93□□□□□ -1.3
CHRNA1P02708 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.93□□□□□ -1.3
CHRNA1P02708 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.93□□□□□ -1.3
CHRNA1P02708 AL512652.1-201ENST00000619006 500 ntBASIC6.93□□□□□ -1.3
CHRNA1P02708 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.93□□□□□ -1.3
CHRNA1P02708 AC129915.3-201ENST00000634128 948 ntBASIC6.93□□□□□ -1.3
CHRNA1P02708 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
CHRNA1P02708 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHRNA1P02708 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
CHRNA1P02708 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.93□□□□□ -1.3
CHRNA1P02708 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHRNA1P02708 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CHRNA1P02708 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHRNA1P02708 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.93□□□□□ -1.3
CHRNA1P02708 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHRNA1P02708 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.93□□□□□ -1.3
CHRNA1P02708 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
CHRNA1P02708 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHRNA1P02708 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHRNA1P02708 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.93□□□□□ -1.3
CHRNA1P02708 AC009120.2-204ENST00000621548 2032 ntBASIC6.93□□□□□ -1.3
CHRNA1P02708 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHRNA1P02708 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHRNA1P02708 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.92□□□□□ -1.3
CHRNA1P02708 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CHRNA1P02708 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
CHRNA1P02708 OR2M1P-201ENST00000318104 951 ntBASIC6.92□□□□□ -1.3
CHRNA1P02708 AL023284.3-201ENST00000407767 334 ntBASIC6.92□□□□□ -1.3
CHRNA1P02708 RN7SKP144-201ENST00000411108 279 ntBASIC6.92□□□□□ -1.3
CHRNA1P02708 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.92□□□□□ -1.3
CHRNA1P02708 RPS3P2-201ENST00000421346 701 ntBASIC6.92□□□□□ -1.3
CHRNA1P02708 AC104843.2-201ENST00000427666 297 ntBASIC6.92□□□□□ -1.3
CHRNA1P02708 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CHRNA1P02708 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.92□□□□□ -1.3
CHRNA1P02708 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.92□□□□□ -1.3
CHRNA1P02708 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.92□□□□□ -1.3
CHRNA1P02708 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.92□□□□□ -1.3
CHRNA1P02708 AL953862.2-201ENST00000603089 820 ntBASIC6.92□□□□□ -1.3
CHRNA1P02708 AP001823.1-201ENST00000604056 1003 ntBASIC6.92□□□□□ -1.3
CHRNA1P02708 AC013731.1-201ENST00000604340 883 ntBASIC6.92□□□□□ -1.3
CHRNA1P02708 AC010998.3-201ENST00000613871 631 ntBASIC6.92□□□□□ -1.3
CHRNA1P02708 RFPL4AP6-201ENST00000616792 846 ntBASIC6.92□□□□□ -1.3
CHRNA1P02708 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.92□□□□□ -1.3
CHRNA1P02708 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.92□□□□□ -1.3
CHRNA1P02708 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHRNA1P02708 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.92□□□□□ -1.3
CHRNA1P02708 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CHRNA1P02708 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHRNA1P02708 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CHRNA1P02708 AC011455.2-201ENST00000599320 3336 ntBASIC6.92□□□□□ -1.3
CHRNA1P02708 AC010624.4-201ENST00000597606 1351 ntBASIC6.92□□□□□ -1.3
CHRNA1P02708 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CHRNA1P02708 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.92□□□□□ -1.3
CHRNA1P02708 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHRNA1P02708 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CHRNA1P02708 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.92□□□□□ -1.3
CHRNA1P02708 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.92□□□□□ -1.3
CHRNA1P02708 MTCO1P28-201ENST00000574177 1528 ntBASIC6.91□□□□□ -1.3
CHRNA1P02708 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms