Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SPTA1P02549 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SPTA1P02549 RNU1-19P-201ENST00000363306 165 ntBASIC5.83□□□□□ -1.48
SPTA1P02549 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SPTA1P02549 MIR1286-201ENST00000408112 78 ntBASIC5.83□□□□□ -1.48
SPTA1P02549 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SPTA1P02549 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.83□□□□□ -1.48
SPTA1P02549 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.83□□□□□ -1.48
SPTA1P02549 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.83□□□□□ -1.48
SPTA1P02549 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.83□□□□□ -1.48
SPTA1P02549 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.83□□□□□ -1.48
SPTA1P02549 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.83□□□□□ -1.48
SPTA1P02549 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SPTA1P02549 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
SPTA1P02549 CDY7P-201ENST00000429883 1604 ntBASIC5.83□□□□□ -1.48
SPTA1P02549 AL596244.1-201ENST00000567068 3779 ntBASIC5.83□□□□□ -1.48
SPTA1P02549 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SPTA1P02549 AP003972.1-201ENST00000625192 5446 ntBASIC5.83□□□□□ -1.48
SPTA1P02549 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SPTA1P02549 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SPTA1P02549 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SPTA1P02549 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SPTA1P02549 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SPTA1P02549 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SPTA1P02549 SNORA21-201ENST00000362423 132 ntBASIC5.83□□□□□ -1.48
SPTA1P02549 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.83□□□□□ -1.48
SPTA1P02549 RN7SKP232-201ENST00000410170 290 ntBASIC5.83□□□□□ -1.48
SPTA1P02549 CYCSP52-201ENST00000422857 310 ntBASIC5.83□□□□□ -1.48
SPTA1P02549 AC114755.4-201ENST00000439114 443 ntBASIC5.83□□□□□ -1.48
SPTA1P02549 GAPDHP33-201ENST00000443168 1013 ntBASIC5.83□□□□□ -1.48
SPTA1P02549 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.83□□□□□ -1.48
SPTA1P02549 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.83□□□□□ -1.48
SPTA1P02549 UBFD1P1-201ENST00000473259 814 ntBASIC5.83□□□□□ -1.48
SPTA1P02549 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC5.83□□□□□ -1.48
SPTA1P02549 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.83□□□□□ -1.48
SPTA1P02549 EEF1B2P2-201ENST00000519625 676 ntBASIC5.83□□□□□ -1.48
SPTA1P02549 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.83□□□□□ -1.48
SPTA1P02549 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.83□□□□□ -1.48
SPTA1P02549 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SPTA1P02549 OR4A21P-201ENST00000532759 944 ntBASIC5.83□□□□□ -1.48
SPTA1P02549 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.83□□□□□ -1.48
SPTA1P02549 AC022404.1-201ENST00000555320 273 ntBASIC5.83□□□□□ -1.48
SPTA1P02549 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC5.83□□□□□ -1.48
SPTA1P02549 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC5.83□□□□□ -1.48
SPTA1P02549 SETP3-201ENST00000581726 813 ntBASIC5.83□□□□□ -1.48
SPTA1P02549 AC087575.1-201ENST00000585087 229 ntBASIC5.83□□□□□ -1.48
SPTA1P02549 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SPTA1P02549 AC073046.2-201ENST00000604756 527 ntBASIC5.83□□□□□ -1.48
SPTA1P02549 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.83□□□□□ -1.48
SPTA1P02549 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SPTA1P02549 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SPTA1P02549 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SPTA1P02549 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SPTA1P02549 AC125238.2-201ENST00000430003 1440 ntBASIC5.82□□□□□ -1.48
SPTA1P02549 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.82□□□□□ -1.48
SPTA1P02549 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SPTA1P02549 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.82□□□□□ -1.48
SPTA1P02549 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
SPTA1P02549 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.82□□□□□ -1.48
SPTA1P02549 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
SPTA1P02549 AL645927.1-201ENST00000396783 406 ntBASIC5.82□□□□□ -1.48
SPTA1P02549 AL157702.1-201ENST00000398764 426 ntBASIC5.82□□□□□ -1.48
SPTA1P02549 AL096711.1-201ENST00000404780 554 ntBASIC5.82□□□□□ -1.48
SPTA1P02549 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.82□□□□□ -1.48
SPTA1P02549 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.82□□□□□ -1.48
SPTA1P02549 RN7SL326P-201ENST00000477493 296 ntBASIC5.82□□□□□ -1.48
SPTA1P02549 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.82□□□□□ -1.48
SPTA1P02549 AC008429.2-201ENST00000523057 864 ntBASIC5.82□□□□□ -1.48
SPTA1P02549 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.82□□□□□ -1.48
SPTA1P02549 AC016144.1-201ENST00000548175 1087 ntBASIC5.82□□□□□ -1.48
SPTA1P02549 AC079600.1-201ENST00000550326 297 ntBASIC5.82□□□□□ -1.48
SPTA1P02549 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.82□□□□□ -1.48
SPTA1P02549 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.82□□□□□ -1.48
SPTA1P02549 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.82□□□□□ -1.48
SPTA1P02549 AC100827.5-201ENST00000615883 426 ntBASIC5.82□□□□□ -1.48
SPTA1P02549 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SPTA1P02549 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC5.82□□□□□ -1.48
SPTA1P02549 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SPTA1P02549 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SPTA1P02549 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC5.82□□□□□ -1.48
SPTA1P02549 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SPTA1P02549 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SPTA1P02549 AC009948.5-201ENST00000624360 4406 ntBASIC5.82□□□□□ -1.48
SPTA1P02549 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC5.82□□□□□ -1.48
SPTA1P02549 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SPTA1P02549 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SPTA1P02549 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SPTA1P02549 MIR141-201ENST00000384975 95 ntBASIC5.82□□□□□ -1.48
SPTA1P02549 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.82□□□□□ -1.48
SPTA1P02549 RPS4XP23-201ENST00000487801 237 ntBASIC5.82□□□□□ -1.48
SPTA1P02549 NDUFA5P12-201ENST00000503796 343 ntBASIC5.82□□□□□ -1.48
SPTA1P02549 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.82□□□□□ -1.48
SPTA1P02549 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.82□□□□□ -1.48
SPTA1P02549 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.82□□□□□ -1.48
SPTA1P02549 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.82□□□□□ -1.48
SPTA1P02549 MRPS21P8-201ENST00000569196 235 ntBASIC5.82□□□□□ -1.48
SPTA1P02549 AL121612.2-201ENST00000612261 482 ntBASIC5.82□□□□□ -1.48
SPTA1P02549 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SPTA1P02549 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC5.81□□□□□ -1.48
SPTA1P02549 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms