Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
SOX1O00570 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SOX1O00570 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SOX1O00570 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SOX1O00570 API5P1-201ENST00000424316 1510 ntBASIC7.75□□□□□ -1.17
SOX1O00570 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SOX1O00570 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SOX1O00570 MIR498-201ENST00000385134 124 ntBASIC7.75□□□□□ -1.17
SOX1O00570 MTND4LP20-201ENST00000402379 270 ntBASIC7.75□□□□□ -1.17
SOX1O00570 AL021407.1-201ENST00000404531 386 ntBASIC7.75□□□□□ -1.17
SOX1O00570 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.75□□□□□ -1.17
SOX1O00570 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC7.75□□□□□ -1.17
SOX1O00570 AL445183.3-201ENST00000414168 502 ntBASIC7.75□□□□□ -1.17
SOX1O00570 P2RY10P2-201ENST00000416730 913 ntBASIC7.75□□□□□ -1.17
SOX1O00570 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC7.75□□□□□ -1.17
SOX1O00570 AC092042.2-201ENST00000417304 331 ntBASIC7.75□□□□□ -1.17
SOX1O00570 MTND4P3-201ENST00000417829 541 ntBASIC7.75□□□□□ -1.17
SOX1O00570 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.75□□□□□ -1.17
SOX1O00570 AL606490.7-201ENST00000433136 191 ntBASIC7.75□□□□□ -1.17
SOX1O00570 MTATP6P13-201ENST00000438531 667 ntBASIC7.75□□□□□ -1.17
SOX1O00570 AC245517.2-201ENST00000442890 346 ntBASIC7.75□□□□□ -1.17
SOX1O00570 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.75□□□□□ -1.17
SOX1O00570 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC7.75□□□□□ -1.17
SOX1O00570 OTX2P1-201ENST00000450956 354 ntBASIC7.75□□□□□ -1.17
SOX1O00570 MRPL42P4-201ENST00000453267 443 ntBASIC7.75□□□□□ -1.17
SOX1O00570 MRPL35P4-201ENST00000453682 566 ntBASIC7.75□□□□□ -1.17
SOX1O00570 OSTCP1-201ENST00000455507 450 ntBASIC7.75□□□□□ -1.17
SOX1O00570 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC7.75□□□□□ -1.17
SOX1O00570 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC7.75□□□□□ -1.17
SOX1O00570 AC004815.1-201ENST00000484185 331 ntBASIC7.75□□□□□ -1.17
SOX1O00570 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC7.75□□□□□ -1.17
SOX1O00570 RN7SL362P-201ENST00000494228 267 ntBASIC7.75□□□□□ -1.17
SOX1O00570 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC7.75□□□□□ -1.17
SOX1O00570 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC7.75□□□□□ -1.17
SOX1O00570 RNA5SP441-201ENST00000516809 88 ntBASIC7.75□□□□□ -1.17
SOX1O00570 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SOX1O00570 IGLV1-62-201ENST00000518003 441 ntBASIC7.75□□□□□ -1.17
SOX1O00570 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.75□□□□□ -1.17
SOX1O00570 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.75□□□□□ -1.17
SOX1O00570 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC7.75□□□□□ -1.17
SOX1O00570 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SOX1O00570 AL121834.1-201ENST00000572284 509 ntBASIC7.75□□□□□ -1.17
SOX1O00570 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.75□□□□□ -1.17
SOX1O00570 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC7.75□□□□□ -1.17
SOX1O00570 RPL29P33-201ENST00000587474 316 ntBASIC7.75□□□□□ -1.17
SOX1O00570 AC008521.2-201ENST00000591021 259 ntBASIC7.75□□□□□ -1.17
SOX1O00570 AL031601.1-201ENST00000605702 394 ntBASIC7.75□□□□□ -1.17
SOX1O00570 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC7.75□□□□□ -1.17
SOX1O00570 CDC37L1-AS1-201ENST00000607997 463 ntTSL 5 BASIC7.75□□□□□ -1.17
SOX1O00570 AC068944.2-201ENST00000610373 403 ntBASIC7.75□□□□□ -1.17
SOX1O00570 AC018755.4-201ENST00000619715 454 ntBASIC7.75□□□□□ -1.17
SOX1O00570 AC015804.1-201ENST00000622935 435 ntBASIC7.75□□□□□ -1.17
SOX1O00570 AC091931.1-201ENST00000623488 728 ntBASIC7.75□□□□□ -1.17
SOX1O00570 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC7.75□□□□□ -1.17
SOX1O00570 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC7.75□□□□□ -1.17
SOX1O00570 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SOX1O00570 EXOC7P1-201ENST00000509881 2059 ntBASIC7.75□□□□□ -1.17
SOX1O00570 BX005019.1-201ENST00000561881 1810 ntBASIC7.75□□□□□ -1.17
SOX1O00570 LINC01182-202ENST00000510907 2228 ntTSL 2 BASIC7.75□□□□□ -1.17
SOX1O00570 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SOX1O00570 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SOX1O00570 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
SOX1O00570 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SOX1O00570 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.75□□□□□ -1.17
SOX1O00570 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SOX1O00570 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SOX1O00570 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SOX1O00570 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC7.74□□□□□ -1.17
SOX1O00570 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC7.74□□□□□ -1.17
SOX1O00570 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.74□□□□□ -1.17
SOX1O00570 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SOX1O00570 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC7.74□□□□□ -1.17
SOX1O00570 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SOX1O00570 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SOX1O00570 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
SOX1O00570 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SOX1O00570 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC7.74□□□□□ -1.17
SOX1O00570 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SOX1O00570 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
SOX1O00570 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
SOX1O00570 RN7SKP189-201ENST00000365042 330 ntBASIC7.74□□□□□ -1.17
SOX1O00570 AC096644.3-201ENST00000416788 338 ntBASIC7.74□□□□□ -1.17
SOX1O00570 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SOX1O00570 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.74□□□□□ -1.17
SOX1O00570 GCA-203ENST00000429691 824 ntTSL 3 BASIC7.74□□□□□ -1.17
SOX1O00570 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7.74□□□□□ -1.17
SOX1O00570 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SOX1O00570 RPL7AP71-201ENST00000451120 739 ntBASIC7.74□□□□□ -1.17
SOX1O00570 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC7.74□□□□□ -1.17
SOX1O00570 VN1R32P-201ENST00000452234 905 ntBASIC7.74□□□□□ -1.17
SOX1O00570 Z95152.1-201ENST00000453556 656 ntBASIC7.74□□□□□ -1.17
SOX1O00570 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC7.74□□□□□ -1.17
SOX1O00570 PSMA6P2-201ENST00000457574 686 ntBASIC7.74□□□□□ -1.17
SOX1O00570 RNU7-125P-201ENST00000458760 62 ntBASIC7.74□□□□□ -1.17
SOX1O00570 AC084754.1-201ENST00000463466 464 ntBASIC7.74□□□□□ -1.17
SOX1O00570 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC7.74□□□□□ -1.17
SOX1O00570 RN7SL332P-201ENST00000482163 254 ntBASIC7.74□□□□□ -1.17
SOX1O00570 RN7SL284P-201ENST00000498823 275 ntBASIC7.74□□□□□ -1.17
SOX1O00570 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SOX1O00570 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms