Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
FOXN3O00409 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
FOXN3O00409 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.99□□□□□ -1.29
FOXN3O00409 AC004023.1-201ENST00000561473 1744 ntBASIC6.98□□□□□ -1.29
FOXN3O00409 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
FOXN3O00409 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
FOXN3O00409 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
FOXN3O00409 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
FOXN3O00409 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
FOXN3O00409 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.98□□□□□ -1.29
FOXN3O00409 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
FOXN3O00409 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
FOXN3O00409 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
FOXN3O00409 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
FOXN3O00409 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.98□□□□□ -1.29
FOXN3O00409 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
FOXN3O00409 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
FOXN3O00409 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
FOXN3O00409 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
FOXN3O00409 RNA5SP308-201ENST00000362532 115 ntBASIC6.98□□□□□ -1.29
FOXN3O00409 AC092634.1-201ENST00000366505 199 ntBASIC6.98□□□□□ -1.29
FOXN3O00409 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
FOXN3O00409 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
FOXN3O00409 AC026310.1-201ENST00000396004 378 ntBASIC6.98□□□□□ -1.29
FOXN3O00409 AC006509.1-201ENST00000420788 634 ntBASIC6.98□□□□□ -1.29
FOXN3O00409 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.98□□□□□ -1.29
FOXN3O00409 AL590762.3-201ENST00000436372 640 ntBASIC6.98□□□□□ -1.29
FOXN3O00409 MRPS21P3-201ENST00000436696 262 ntBASIC6.98□□□□□ -1.29
FOXN3O00409 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC6.98□□□□□ -1.29
FOXN3O00409 HMGN1P32-201ENST00000441744 256 ntBASIC6.98□□□□□ -1.29
FOXN3O00409 MGAT2P1-201ENST00000449718 797 ntBASIC6.98□□□□□ -1.29
FOXN3O00409 AL451063.1-201ENST00000450164 1133 ntBASIC6.98□□□□□ -1.29
FOXN3O00409 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC6.98□□□□□ -1.29
FOXN3O00409 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.98□□□□□ -1.29
FOXN3O00409 OR9N1P-201ENST00000491296 333 ntBASIC6.98□□□□□ -1.29
FOXN3O00409 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
FOXN3O00409 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.98□□□□□ -1.29
FOXN3O00409 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.98□□□□□ -1.29
FOXN3O00409 RNA5SP96-201ENST00000516041 107 ntBASIC6.98□□□□□ -1.29
FOXN3O00409 MTND1P36-201ENST00000522384 936 ntBASIC6.98□□□□□ -1.29
FOXN3O00409 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
FOXN3O00409 AC005519.1-201ENST00000554490 601 ntBASIC6.98□□□□□ -1.29
FOXN3O00409 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.98□□□□□ -1.29
FOXN3O00409 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.98□□□□□ -1.29
FOXN3O00409 MIR4301-201ENST00000577203 66 ntBASIC6.98□□□□□ -1.29
FOXN3O00409 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.98□□□□□ -1.29
FOXN3O00409 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.98□□□□□ -1.29
FOXN3O00409 AC241377.1-201ENST00000619797 406 ntBASIC6.98□□□□□ -1.29
FOXN3O00409 AC091059.2-201ENST00000623355 614 ntBASIC6.98□□□□□ -1.29
FOXN3O00409 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.98□□□□□ -1.29
FOXN3O00409 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
FOXN3O00409 LCOR-201ENST00000286067 4542 ntBASIC6.98□□□□□ -1.29
FOXN3O00409 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
FOXN3O00409 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
FOXN3O00409 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.98□□□□□ -1.29
FOXN3O00409 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
FOXN3O00409 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
FOXN3O00409 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.98□□□□□ -1.29
FOXN3O00409 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
FOXN3O00409 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
FOXN3O00409 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
FOXN3O00409 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.97□□□□□ -1.29
FOXN3O00409 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
FOXN3O00409 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.97□□□□□ -1.29
FOXN3O00409 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
FOXN3O00409 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.97□□□□□ -1.29
FOXN3O00409 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.97□□□□□ -1.29
FOXN3O00409 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.97□□□□□ -1.29
FOXN3O00409 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
FOXN3O00409 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
FOXN3O00409 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
FOXN3O00409 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
FOXN3O00409 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
FOXN3O00409 RNU6-1331P-201ENST00000363658 106 ntBASIC6.97□□□□□ -1.29
FOXN3O00409 RNA5SP442-201ENST00000365050 107 ntBASIC6.97□□□□□ -1.29
FOXN3O00409 RANP6-201ENST00000413691 644 ntBASIC6.97□□□□□ -1.29
FOXN3O00409 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.97□□□□□ -1.29
FOXN3O00409 RPL23AP85-201ENST00000421838 433 ntBASIC6.97□□□□□ -1.29
FOXN3O00409 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.97□□□□□ -1.29
FOXN3O00409 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.97□□□□□ -1.29
FOXN3O00409 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
FOXN3O00409 CCNJP1-201ENST00000450600 1149 ntBASIC6.97□□□□□ -1.29
FOXN3O00409 AKR1D1P1-201ENST00000457236 936 ntBASIC6.97□□□□□ -1.29
FOXN3O00409 AC016687.1-201ENST00000482574 353 ntBASIC6.97□□□□□ -1.29
FOXN3O00409 AC022206.1-201ENST00000495947 347 ntBASIC6.97□□□□□ -1.29
FOXN3O00409 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.97□□□□□ -1.29
FOXN3O00409 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
FOXN3O00409 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.97□□□□□ -1.29
FOXN3O00409 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.97□□□□□ -1.29
FOXN3O00409 AC073916.1-201ENST00000545095 130 ntBASIC6.97□□□□□ -1.29
FOXN3O00409 OR4C49P-201ENST00000563891 900 ntBASIC6.97□□□□□ -1.29
FOXN3O00409 AC090079.2-201ENST00000575289 768 ntBASIC6.97□□□□□ -1.29
FOXN3O00409 MIR3159-201ENST00000584572 74 ntBASIC6.97□□□□□ -1.29
FOXN3O00409 AC011497.2-201ENST00000600255 639 ntBASIC6.97□□□□□ -1.29
FOXN3O00409 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.97□□□□□ -1.29
FOXN3O00409 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.97□□□□□ -1.29
FOXN3O00409 AC074141.1-201ENST00000588129 2995 ntBASIC6.97□□□□□ -1.29
FOXN3O00409 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
FOXN3O00409 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
FOXN3O00409 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms