Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDLIM1O00151 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
PDLIM1O00151 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.15□□□□□ -1.42
PDLIM1O00151 AL050335.1-201ENST00000396909 869 ntBASIC6.15□□□□□ -1.42
PDLIM1O00151 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDLIM1O00151 AL049697.3-201ENST00000406493 982 ntBASIC6.15□□□□□ -1.42
PDLIM1O00151 AL023284.3-201ENST00000407767 334 ntBASIC6.15□□□□□ -1.42
PDLIM1O00151 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.15□□□□□ -1.42
PDLIM1O00151 AL663061.1-201ENST00000416625 580 ntBASIC6.15□□□□□ -1.42
PDLIM1O00151 AC007365.2-201ENST00000428806 458 ntBASIC6.15□□□□□ -1.42
PDLIM1O00151 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.15□□□□□ -1.42
PDLIM1O00151 ST13P21-201ENST00000453250 1098 ntBASIC6.15□□□□□ -1.42
PDLIM1O00151 NMNAT1P3-201ENST00000457517 888 ntBASIC6.15□□□□□ -1.42
PDLIM1O00151 AL355032.1-201ENST00000472981 438 ntBASIC6.15□□□□□ -1.42
PDLIM1O00151 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.15□□□□□ -1.42
PDLIM1O00151 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC6.15□□□□□ -1.42
PDLIM1O00151 RNA5SP96-201ENST00000516041 107 ntBASIC6.15□□□□□ -1.42
PDLIM1O00151 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.15□□□□□ -1.42
PDLIM1O00151 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDLIM1O00151 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PDLIM1O00151 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.15□□□□□ -1.42
PDLIM1O00151 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.15□□□□□ -1.42
PDLIM1O00151 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.15□□□□□ -1.42
PDLIM1O00151 AL132640.1-201ENST00000559594 619 ntBASIC6.15□□□□□ -1.42
PDLIM1O00151 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.15□□□□□ -1.42
PDLIM1O00151 MIR4428-201ENST00000584884 73 ntBASIC6.15□□□□□ -1.42
PDLIM1O00151 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.15□□□□□ -1.42
PDLIM1O00151 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.15□□□□□ -1.42
PDLIM1O00151 AC010503.3-201ENST00000594355 540 ntBASIC6.15□□□□□ -1.42
PDLIM1O00151 AL034374.2-201ENST00000605281 548 ntBASIC6.15□□□□□ -1.42
PDLIM1O00151 PTCHD3P1-201ENST00000612350 537 ntBASIC6.15□□□□□ -1.42
PDLIM1O00151 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDLIM1O00151 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
PDLIM1O00151 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PDLIM1O00151 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.15□□□□□ -1.43
PDLIM1O00151 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PDLIM1O00151 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
PDLIM1O00151 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PDLIM1O00151 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
PDLIM1O00151 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
PDLIM1O00151 AC020658.2-201ENST00000559030 4020 ntBASIC6.15□□□□□ -1.43
PDLIM1O00151 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM1O00151 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM1O00151 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PDLIM1O00151 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM1O00151 DLEU2L-201ENST00000371086 3555 ntBASIC6.14□□□□□ -1.43
PDLIM1O00151 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
PDLIM1O00151 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PDLIM1O00151 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM1O00151 EI24P3-201ENST00000399046 1062 ntBASIC6.14□□□□□ -1.43
PDLIM1O00151 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.14□□□□□ -1.43
PDLIM1O00151 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.14□□□□□ -1.43
PDLIM1O00151 AC009303.1-201ENST00000426307 352 ntBASIC6.14□□□□□ -1.43
PDLIM1O00151 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.14□□□□□ -1.43
PDLIM1O00151 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.14□□□□□ -1.43
PDLIM1O00151 PUDPP2-201ENST00000431423 643 ntBASIC6.14□□□□□ -1.43
PDLIM1O00151 AC009518.3-201ENST00000438972 253 ntBASIC6.14□□□□□ -1.43
PDLIM1O00151 AL845321.1-201ENST00000444603 348 ntBASIC6.14□□□□□ -1.43
PDLIM1O00151 TREML3P-201ENST00000457327 501 ntBASIC6.14□□□□□ -1.43
PDLIM1O00151 RN7SL849P-201ENST00000485236 295 ntBASIC6.14□□□□□ -1.43
PDLIM1O00151 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.14□□□□□ -1.43
PDLIM1O00151 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.14□□□□□ -1.43
PDLIM1O00151 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.14□□□□□ -1.43
PDLIM1O00151 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.14□□□□□ -1.43
PDLIM1O00151 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.14□□□□□ -1.43
PDLIM1O00151 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.14□□□□□ -1.43
PDLIM1O00151 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM1O00151 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM1O00151 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.14□□□□□ -1.43
PDLIM1O00151 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM1O00151 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.14□□□□□ -1.43
PDLIM1O00151 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.14□□□□□ -1.43
PDLIM1O00151 AC106785.4-201ENST00000569492 412 ntBASIC6.14□□□□□ -1.43
PDLIM1O00151 AC100832.2-201ENST00000582080 776 ntBASIC6.14□□□□□ -1.43
PDLIM1O00151 OR7E19P-202ENST00000589942 844 ntBASIC6.14□□□□□ -1.43
PDLIM1O00151 AC011447.2-201ENST00000592921 283 ntBASIC6.14□□□□□ -1.43
PDLIM1O00151 AL022394.1-201ENST00000606979 292 ntBASIC6.14□□□□□ -1.43
PDLIM1O00151 AC116165.3-201ENST00000614524 400 ntBASIC6.14□□□□□ -1.43
PDLIM1O00151 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.14□□□□□ -1.43
PDLIM1O00151 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.14□□□□□ -1.43
PDLIM1O00151 AL121936.2-201ENST00000641935 662 ntBASIC6.14□□□□□ -1.43
PDLIM1O00151 NR1H5P-201ENST00000452683 1377 ntBASIC6.14□□□□□ -1.43
PDLIM1O00151 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
PDLIM1O00151 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.14□□□□□ -1.43
PDLIM1O00151 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM1O00151 AC093849.1-201ENST00000563631 2209 ntBASIC6.14□□□□□ -1.43
PDLIM1O00151 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM1O00151 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.14□□□□□ -1.43
PDLIM1O00151 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM1O00151 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM1O00151 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PDLIM1O00151 AC006600.2-201ENST00000624834 2506 ntBASIC6.14□□□□□ -1.43
PDLIM1O00151 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM1O00151 AL078595.2-201ENST00000605309 1780 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM1O00151 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PDLIM1O00151 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PDLIM1O00151 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.13□□□□□ -1.43
PDLIM1O00151 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.13□□□□□ -1.43
PDLIM1O00151 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms