Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
YIPF1Q9Y548 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.73■□□□□ 0.91
YIPF1Q9Y548 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
YIPF1Q9Y548 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
YIPF1Q9Y548 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
YIPF1Q9Y548 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
YIPF1Q9Y548 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
YIPF1Q9Y548 KRT8P9-201ENST00000558927 1449 ntBASIC20.73■□□□□ 0.91
YIPF1Q9Y548 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.73■□□□□ 0.91
YIPF1Q9Y548 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.73■□□□□ 0.91
YIPF1Q9Y548 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.73■□□□□ 0.91
YIPF1Q9Y548 AL445675.2-201ENST00000620291 557 ntBASIC20.73■□□□□ 0.91
YIPF1Q9Y548 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
YIPF1Q9Y548 AC007375.3-201ENST00000600936 2314 ntBASIC20.73■□□□□ 0.91
YIPF1Q9Y548 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
YIPF1Q9Y548 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
YIPF1Q9Y548 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.73■□□□□ 0.91
YIPF1Q9Y548 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
YIPF1Q9Y548 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
YIPF1Q9Y548 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.73■□□□□ 0.91
YIPF1Q9Y548 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
YIPF1Q9Y548 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
YIPF1Q9Y548 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
YIPF1Q9Y548 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
YIPF1Q9Y548 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
YIPF1Q9Y548 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
YIPF1Q9Y548 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
YIPF1Q9Y548 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.72■□□□□ 0.91
YIPF1Q9Y548 MIR1238-201ENST00000408483 83 ntBASIC20.72■□□□□ 0.91
YIPF1Q9Y548 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.72■□□□□ 0.91
YIPF1Q9Y548 TUBB8P6-201ENST00000436895 1288 ntBASIC20.72■□□□□ 0.91
YIPF1Q9Y548 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.72■□□□□ 0.91
YIPF1Q9Y548 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.72■□□□□ 0.91
YIPF1Q9Y548 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
YIPF1Q9Y548 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
YIPF1Q9Y548 BX119927.1-201ENST00000636596 1552 ntBASIC20.72■□□□□ 0.91
YIPF1Q9Y548 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
YIPF1Q9Y548 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
YIPF1Q9Y548 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
YIPF1Q9Y548 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
YIPF1Q9Y548 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
YIPF1Q9Y548 MIR1224-201ENST00000408193 85 ntBASIC20.71■□□□□ 0.91
YIPF1Q9Y548 AL390955.1-201ENST00000428694 934 ntBASIC20.71■□□□□ 0.91
YIPF1Q9Y548 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.71■□□□□ 0.91
YIPF1Q9Y548 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
YIPF1Q9Y548 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.71■□□□□ 0.91
YIPF1Q9Y548 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.71■□□□□ 0.91
YIPF1Q9Y548 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.71■□□□□ 0.91
YIPF1Q9Y548 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
YIPF1Q9Y548 AL031985.4-201ENST00000642138 673 ntBASIC20.71■□□□□ 0.91
YIPF1Q9Y548 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
YIPF1Q9Y548 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
YIPF1Q9Y548 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
YIPF1Q9Y548 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
YIPF1Q9Y548 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
YIPF1Q9Y548 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.7■□□□□ 0.9
YIPF1Q9Y548 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.7■□□□□ 0.9
YIPF1Q9Y548 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
YIPF1Q9Y548 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YIPF1Q9Y548 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YIPF1Q9Y548 RCN1P1-201ENST00000400413 996 ntBASIC20.7■□□□□ 0.9
YIPF1Q9Y548 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.7■□□□□ 0.9
YIPF1Q9Y548 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.7■□□□□ 0.9
YIPF1Q9Y548 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.7■□□□□ 0.9
YIPF1Q9Y548 MIR6786-201ENST00000616843 113 ntBASIC20.7■□□□□ 0.9
YIPF1Q9Y548 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.7■□□□□ 0.9
YIPF1Q9Y548 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YIPF1Q9Y548 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
YIPF1Q9Y548 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
YIPF1Q9Y548 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.7■□□□□ 0.9
YIPF1Q9Y548 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.7■□□□□ 0.9
YIPF1Q9Y548 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YIPF1Q9Y548 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YIPF1Q9Y548 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
YIPF1Q9Y548 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
YIPF1Q9Y548 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
YIPF1Q9Y548 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
YIPF1Q9Y548 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
YIPF1Q9Y548 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms