Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRG3Q9Y2Y8 KRT16P1-201ENST00000399124 1418 ntBASIC21.21■□□□□ 0.99
PRG3Q9Y2Y8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.21■□□□□ 0.99
PRG3Q9Y2Y8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRG3Q9Y2Y8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRG3Q9Y2Y8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRG3Q9Y2Y8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.21■□□□□ 0.99
PRG3Q9Y2Y8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.21■□□□□ 0.99
PRG3Q9Y2Y8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
PRG3Q9Y2Y8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PRG3Q9Y2Y8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRG3Q9Y2Y8 KRT8P9-201ENST00000558927 1449 ntBASIC21.21■□□□□ 0.99
PRG3Q9Y2Y8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.2■□□□□ 0.99
PRG3Q9Y2Y8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
PRG3Q9Y2Y8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 TFP1-202ENST00000475455 1573 ntBASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 UNC93B2-201ENST00000285383 730 ntBASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 MIR1238-201ENST00000408483 83 ntBASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRG3Q9Y2Y8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PRG3Q9Y2Y8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.19■□□□□ 0.98
PRG3Q9Y2Y8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.19■□□□□ 0.98
PRG3Q9Y2Y8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
PRG3Q9Y2Y8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PRG3Q9Y2Y8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRG3Q9Y2Y8 RCN1P1-201ENST00000400413 996 ntBASIC21.19■□□□□ 0.98
PRG3Q9Y2Y8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.19■□□□□ 0.98
PRG3Q9Y2Y8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.19■□□□□ 0.98
PRG3Q9Y2Y8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRG3Q9Y2Y8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
PRG3Q9Y2Y8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRG3Q9Y2Y8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.19■□□□□ 0.98
PRG3Q9Y2Y8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRG3Q9Y2Y8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PRG3Q9Y2Y8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRG3Q9Y2Y8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRG3Q9Y2Y8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRG3Q9Y2Y8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRG3Q9Y2Y8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRG3Q9Y2Y8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PRG3Q9Y2Y8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRG3Q9Y2Y8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.18■□□□□ 0.98
PRG3Q9Y2Y8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.18■□□□□ 0.98
PRG3Q9Y2Y8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.18■□□□□ 0.98
PRG3Q9Y2Y8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRG3Q9Y2Y8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.18■□□□□ 0.98
PRG3Q9Y2Y8 AL390955.1-201ENST00000428694 934 ntBASIC21.18■□□□□ 0.98
PRG3Q9Y2Y8 C1QL1P1-201ENST00000568105 661 ntBASIC21.18■□□□□ 0.98
PRG3Q9Y2Y8 MIR6786-201ENST00000616843 113 ntBASIC21.18■□□□□ 0.98
PRG3Q9Y2Y8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRG3Q9Y2Y8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRG3Q9Y2Y8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRG3Q9Y2Y8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PRG3Q9Y2Y8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.17■□□□□ 0.98
PRG3Q9Y2Y8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.17■□□□□ 0.98
PRG3Q9Y2Y8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRG3Q9Y2Y8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRG3Q9Y2Y8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRG3Q9Y2Y8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.17■□□□□ 0.98
PRG3Q9Y2Y8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PRG3Q9Y2Y8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.17■□□□□ 0.98
PRG3Q9Y2Y8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRG3Q9Y2Y8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRG3Q9Y2Y8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms