Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF6Q9Y252 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF6Q9Y252 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF6Q9Y252 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF6Q9Y252 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF6Q9Y252 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF6Q9Y252 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF6Q9Y252 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF6Q9Y252 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF6Q9Y252 AP000974.1-201ENST00000623909 2387 ntBASIC18.6■□□□□ 0.57
RNF6Q9Y252 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF6Q9Y252 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF6Q9Y252 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF6Q9Y252 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF6Q9Y252 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF6Q9Y252 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF6Q9Y252 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF6Q9Y252 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF6Q9Y252 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF6Q9Y252 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF6Q9Y252 DUSP5P2-201ENST00000426873 1033 ntBASIC18.59■□□□□ 0.57
RNF6Q9Y252 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF6Q9Y252 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF6Q9Y252 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.59■□□□□ 0.57
RNF6Q9Y252 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF6Q9Y252 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF6Q9Y252 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF6Q9Y252 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF6Q9Y252 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
RNF6Q9Y252 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RNF6Q9Y252 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF6Q9Y252 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF6Q9Y252 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.58■□□□□ 0.57
RNF6Q9Y252 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
RNF6Q9Y252 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
RNF6Q9Y252 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RNF6Q9Y252 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.58■□□□□ 0.57
RNF6Q9Y252 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
RNF6Q9Y252 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
RNF6Q9Y252 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF6Q9Y252 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.58■□□□□ 0.57
RNF6Q9Y252 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF6Q9Y252 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF6Q9Y252 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.58■□□□□ 0.57
RNF6Q9Y252 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF6Q9Y252 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF6Q9Y252 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RNF6Q9Y252 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF6Q9Y252 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF6Q9Y252 ESRRAP1-201ENST00000400596 1257 ntBASIC18.58■□□□□ 0.56
RNF6Q9Y252 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF6Q9Y252 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RNF6Q9Y252 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF6Q9Y252 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF6Q9Y252 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF6Q9Y252 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF6Q9Y252 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF6Q9Y252 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF6Q9Y252 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF6Q9Y252 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF6Q9Y252 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF6Q9Y252 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF6Q9Y252 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RNF6Q9Y252 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF6Q9Y252 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF6Q9Y252 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF6Q9Y252 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF6Q9Y252 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF6Q9Y252 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF6Q9Y252 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF6Q9Y252 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF6Q9Y252 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF6Q9Y252 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RNF6Q9Y252 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF6Q9Y252 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF6Q9Y252 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF6Q9Y252 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RNF6Q9Y252 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF6Q9Y252 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF6Q9Y252 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF6Q9Y252 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF6Q9Y252 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF6Q9Y252 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RNF6Q9Y252 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF6Q9Y252 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.56■□□□□ 0.56
RNF6Q9Y252 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF6Q9Y252 RPS2P52-201ENST00000469610 820 ntBASIC18.56■□□□□ 0.56
RNF6Q9Y252 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.56■□□□□ 0.56
RNF6Q9Y252 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF6Q9Y252 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF6Q9Y252 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF6Q9Y252 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF6Q9Y252 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF6Q9Y252 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF6Q9Y252 TNXA-203ENST00000507684 2038 ntBASIC18.56■□□□□ 0.56
RNF6Q9Y252 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF6Q9Y252 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RNF6Q9Y252 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF6Q9Y252 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RNF6Q9Y252 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms