Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.07■□□□□ 0.32
TREM2Q9NZC2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.07■□□□□ 0.32
TREM2Q9NZC2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.07■□□□□ 0.32
TREM2Q9NZC2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TREM2Q9NZC2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TREM2Q9NZC2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TREM2Q9NZC2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TREM2Q9NZC2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TREM2Q9NZC2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.07■□□□□ 0.32
TREM2Q9NZC2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.07■□□□□ 0.32
TREM2Q9NZC2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TREM2Q9NZC2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TREM2Q9NZC2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.07■□□□□ 0.32
TREM2Q9NZC2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 AC098590.1-201ENST00000468126 897 ntBASIC17.06■□□□□ 0.32
TREM2Q9NZC2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 SOX15-203ENST00000570788 1093 ntBASIC17.06■□□□□ 0.32
TREM2Q9NZC2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 AC073648.6-201ENST00000641589 218 ntBASIC17.06■□□□□ 0.32
TREM2Q9NZC2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TREM2Q9NZC2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TREM2Q9NZC2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TREM2Q9NZC2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TREM2Q9NZC2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TREM2Q9NZC2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TREM2Q9NZC2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.05■□□□□ 0.32
TREM2Q9NZC2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.05■□□□□ 0.32
TREM2Q9NZC2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.05■□□□□ 0.32
TREM2Q9NZC2 AC142381.4-202ENST00000563973 229 ntBASIC17.05■□□□□ 0.32
TREM2Q9NZC2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TREM2Q9NZC2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.05■□□□□ 0.32
TREM2Q9NZC2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TREM2Q9NZC2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TREM2Q9NZC2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TREM2Q9NZC2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TREM2Q9NZC2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TREM2Q9NZC2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.04■□□□□ 0.32
TREM2Q9NZC2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 DPP3P2-201ENST00000416030 1696 ntBASIC17.04■□□□□ 0.32
TREM2Q9NZC2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.04■□□□□ 0.32
TREM2Q9NZC2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TREM2Q9NZC2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TREM2Q9NZC2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.03■□□□□ 0.32
TREM2Q9NZC2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TREM2Q9NZC2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.03■□□□□ 0.32
TREM2Q9NZC2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TREM2Q9NZC2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TREM2Q9NZC2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TREM2Q9NZC2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TREM2Q9NZC2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TREM2Q9NZC2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TREM2Q9NZC2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms