Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 AC133681.1-201ENST00000465482 601 ntBASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 AC066615.1-201ENST00000640911 628 ntBASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 TFP1-202ENST00000475455 1573 ntBASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPHK1Q9NYA1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SPHK1Q9NYA1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SPHK1Q9NYA1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SPHK1Q9NYA1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
SPHK1Q9NYA1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SPHK1Q9NYA1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.08■□□□□ 0.65
SPHK1Q9NYA1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SPHK1Q9NYA1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SPHK1Q9NYA1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.08■□□□□ 0.64
SPHK1Q9NYA1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SPHK1Q9NYA1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SPHK1Q9NYA1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SPHK1Q9NYA1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SPHK1Q9NYA1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.08■□□□□ 0.64
SPHK1Q9NYA1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.08■□□□□ 0.64
SPHK1Q9NYA1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.08■□□□□ 0.64
SPHK1Q9NYA1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
SPHK1Q9NYA1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.08■□□□□ 0.64
SPHK1Q9NYA1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.08■□□□□ 0.64
SPHK1Q9NYA1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SPHK1Q9NYA1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SPHK1Q9NYA1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.08■□□□□ 0.64
SPHK1Q9NYA1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SPHK1Q9NYA1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SPHK1Q9NYA1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
SPHK1Q9NYA1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SPHK1Q9NYA1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SPHK1Q9NYA1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SPHK1Q9NYA1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.07■□□□□ 0.64
SPHK1Q9NYA1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SPHK1Q9NYA1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SPHK1Q9NYA1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.07■□□□□ 0.64
SPHK1Q9NYA1 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.07■□□□□ 0.64
SPHK1Q9NYA1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.07■□□□□ 0.64
SPHK1Q9NYA1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.07■□□□□ 0.64
SPHK1Q9NYA1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.07■□□□□ 0.64
SPHK1Q9NYA1 AC110285.5-201ENST00000611501 352 ntBASIC19.07■□□□□ 0.64
SPHK1Q9NYA1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPHK1Q9NYA1 NBPF21P-201ENST00000425093 1451 ntBASIC19.07■□□□□ 0.64
SPHK1Q9NYA1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPHK1Q9NYA1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPHK1Q9NYA1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SPHK1Q9NYA1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SPHK1Q9NYA1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SPHK1Q9NYA1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPHK1Q9NYA1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SPHK1Q9NYA1 TCF3P1-201ENST00000423021 1937 ntBASIC19.06■□□□□ 0.64
SPHK1Q9NYA1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.06■□□□□ 0.64
SPHK1Q9NYA1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPHK1Q9NYA1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPHK1Q9NYA1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPHK1Q9NYA1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPHK1Q9NYA1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.06■□□□□ 0.64
SPHK1Q9NYA1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.06■□□□□ 0.64
SPHK1Q9NYA1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.06■□□□□ 0.64
SPHK1Q9NYA1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms