Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.419e-9■■■■□ 22
XRN2Q9H0D6 SREBF2-202ENST00000424354 5699 ntTSL 1 (best)13.69□□□□□ -0.229e-9■■■■□ 22
XRN2Q9H0D6 SERTAD2-202ENST00000476805 1068 ntTSL 324.19■■□□□ 1.462e-8■■■■□ 21.9
XRN2Q9H0D6 KRTAP5-AS1-204ENST00000534077 409 ntTSL 322.07■■□□□ 1.125e-6■■■■□ 21.9
XRN2Q9H0D6 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.142e-8■■■■□ 21.9
XRN2Q9H0D6 TNFRSF10B-206ENST00000520109 674 ntTSL 223.05■■□□□ 1.282e-14■■■■□ 21.9
XRN2Q9H0D6 HNRNPK-206ENST00000457156 1283 ntTSL 521.8■■□□□ 1.082e-16■■■■□ 21.9
XRN2Q9H0D6 CIZ1-218ENST00000476727 1205 ntTSL 521.47■■□□□ 1.034e-7■■■■□ 21.9
XRN2Q9H0D6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.94e-7■■■■□ 21.9
XRN2Q9H0D6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.894e-7■■■■□ 21.9
XRN2Q9H0D6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.844e-7■■■■□ 21.9
XRN2Q9H0D6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.632e-16■■■■□ 21.9
XRN2Q9H0D6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.64e-7■■■■□ 21.9
XRN2Q9H0D6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.032e-16■■■■□ 21.9
XRN2Q9H0D6 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.414e-7■■■■□ 21.9
XRN2Q9H0D6 CIZ1-228ENST00000634901 3462 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.454e-7■■■■□ 21.9
XRN2Q9H0D6 CIZ1-225ENST00000538431 2996 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.694e-7■■■■□ 21.9
XRN2Q9H0D6 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.072e-16■■■■□ 21.9
XRN2Q9H0D6 TNFRSF10B-208ENST00000523752 3328 ntTSL 1 (best)7.82□□□□□ -1.161e-18■■■■□ 21.9
XRN2Q9H0D6 HNRNPK-209ENST00000483135 900 ntTSL 27.26□□□□□ -1.252e-6■■■■□ 21.9
XRN2Q9H0D6 HNRNPK-207ENST00000472778 822 ntTSL 37.26□□□□□ -1.252e-6■■■■□ 21.9
XRN2Q9H0D6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.152e-6■■■■□ 21.9
XRN2Q9H0D6 MKNK2-205ENST00000586828 1503 ntTSL 222.36■■□□□ 1.172e-6■■■■□ 21.9
XRN2Q9H0D6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.042e-6■■■■□ 21.9
XRN2Q9H0D6 MKNK2-213ENST00000591601 3582 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.572e-6■■■■□ 21.9
XRN2Q9H0D6 CIRBP-237ENST00000592234 571 ntTSL 522.21■■□□□ 1.154e-7■■■■□ 21.9
XRN2Q9H0D6 LINC00963-205ENST00000444184 1887 ntTSL 1 (best)19.99■□□□□ 0.791e-6■■■■□ 21.9
XRN2Q9H0D6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.47■□□□□ 0.551e-6■■■■□ 21.9
XRN2Q9H0D6 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.24■□□□□ 0.191e-6■■■■□ 21.9
XRN2Q9H0D6 LINC00963-211ENST00000608369 961 ntTSL 5 BASIC13.76□□□□□ -0.211e-6■■■■□ 21.9
XRN2Q9H0D6 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC9.99□□□□□ -0.811e-6■■■■□ 21.9
XRN2Q9H0D6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC24.54■■□□□ 1.528e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.3■■□□□ 18e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.46■□□□□ 0.878e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.59■□□□□ 0.738e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.1■□□□□ 0.658e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-215ENST00000572739 803 ntTSL 418.49■□□□□ 0.558e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC16.23■□□□□ 0.198e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.18e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.038e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.048e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC14.72□□□□□ -0.058e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-209ENST00000571107 561 ntTSL 414.3□□□□□ -0.128e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-212ENST00000572131 558 ntTSL 514.3□□□□□ -0.128e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-219ENST00000573345 608 ntTSL 414.04□□□□□ -0.168e-10■■■■□ 21.9
XRN2Q9H0D6 AC025283.2-202ENST00000575785 560 ntTSL 413.84□□□□□ -0.198e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-207ENST00000570551 673 ntTSL 313.65□□□□□ -0.228e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-230ENST00000575733 700 ntTSL 413.44□□□□□ -0.268e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-224ENST00000574328 552 ntTSL 413.32□□□□□ -0.288e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-233ENST00000576787 570 ntTSL 412.96□□□□□ -0.338e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-218ENST00000573201 657 ntTSL 312.52□□□□□ -0.418e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-221ENST00000573593 565 ntTSL 412.3□□□□□ -0.448e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-206ENST00000570372 398 ntTSL 512.22□□□□□ -0.458e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-220ENST00000573580 758 ntTSL 4 BASIC11.59□□□□□ -0.558e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-227ENST00000574950 584 ntTSL 411.55□□□□□ -0.568e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-210ENST00000571696 626 ntTSL 411.11□□□□□ -0.638e-10■■■■□ 21.9
XRN2Q9H0D6 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC10.25□□□□□ -0.778e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-216ENST00000572757 818 ntTSL 28.94□□□□□ -0.988e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-225ENST00000574380 578 ntTSL 48.01□□□□□ -1.138e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-232ENST00000575936 547 ntTSL 47.64□□□□□ -1.198e-10■■■■□ 21.9
XRN2Q9H0D6 NAA60-213ENST00000572169 582 ntTSL 27.32□□□□□ -1.248e-10■■■■□ 21.9
XRN2Q9H0D6 PRDM10-206ENST00000527581 620 ntTSL 319.62■□□□□ 0.732e-8■■■■□ 21.9
XRN2Q9H0D6 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.09□□□□□ -0.312e-8■■■■□ 21.9
XRN2Q9H0D6 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.312e-8■■■■□ 21.9
XRN2Q9H0D6 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC10.04□□□□□ -0.82e-8■■■■□ 21.9
XRN2Q9H0D6 PRDM10-208ENST00000531431 528 ntTSL 46.31□□□□□ -1.42e-8■■■■□ 21.9
XRN2Q9H0D6 GRK2-202ENST00000416281 4493 ntTSL 214.29□□□□□ -0.121e-6■■■■□ 21.9
XRN2Q9H0D6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.97■□□□□ 0.475e-6■■■■□ 21.8
XRN2Q9H0D6 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.33■□□□□ 0.045e-6■■■■□ 21.8
XRN2Q9H0D6 POFUT2-202ENST00000334538 3077 ntTSL 1 (best)13.08□□□□□ -0.325e-6■■■■□ 21.8
XRN2Q9H0D6 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.395e-6■■■■□ 21.8
XRN2Q9H0D6 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC12.56□□□□□ -0.45e-6■■■■□ 21.8
XRN2Q9H0D6 POFUT2-208ENST00000471540 3176 ntTSL 511.61□□□□□ -0.555e-6■■■■□ 21.8
XRN2Q9H0D6 LRRC8D-207ENST00000532201 597 ntTSL 413.68□□□□□ -0.226e-7■■■■□ 21.8
XRN2Q9H0D6 LRRC8D-203ENST00000414841 666 ntTSL 39.86□□□□□ -0.836e-7■■■■□ 21.8
XRN2Q9H0D6 YY1-202ENST00000553625 422 ntTSL 220.59■□□□□ 0.897e-6■■■■□ 21.8
XRN2Q9H0D6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.357e-6■■■■□ 21.8
XRN2Q9H0D6 COL7A1-210ENST00000487017 5807 ntTSL 516.44■□□□□ 0.221e-6■■■■□ 21.8
XRN2Q9H0D6 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.151e-6■■■■□ 21.8
XRN2Q9H0D6 YY1-205ENST00000554804 1114 ntTSL 38.06□□□□□ -1.127e-6■■■■□ 21.8
XRN2Q9H0D6 PCBP2-208ENST00000546652 823 ntTSL 513.73□□□□□ -0.213e-6■■■■□ 21.8
XRN2Q9H0D6 PCBP2-226ENST00000562264 1145 ntTSL 512.75□□□□□ -0.373e-6■■■■□ 21.8
XRN2Q9H0D6 PCBP2-204ENST00000439930 1296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.373e-6■■■■□ 21.8
XRN2Q9H0D6 PCBP2-223ENST00000552819 1418 ntAPPRIS ALT1 TSL 2 BASIC11.22□□□□□ -0.613e-6■■■■□ 21.8
XRN2Q9H0D6 PCBP2-213ENST00000548933 1202 ntTSL 1 (best) BASIC10.3□□□□□ -0.763e-6■■■■□ 21.8
XRN2Q9H0D6 PCBP2-221ENST00000551104 681 ntTSL 39.94□□□□□ -0.823e-6■■■■□ 21.8
XRN2Q9H0D6 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.923e-6■■■■□ 21.8
XRN2Q9H0D6 PCBP2-216ENST00000550192 734 ntTSL 48.41□□□□□ -1.063e-6■■■■□ 21.8
XRN2Q9H0D6 PCBP2-220ENST00000550910 449 ntTSL 34.9□□□□□ -1.633e-6■■■■□ 21.8
XRN2Q9H0D6 PCBP2-224ENST00000552980 527 ntTSL 33.33□□□□□ -1.883e-6■■■■□ 21.8
XRN2Q9H0D6 ATXN2L-218ENST00000565971 3264 ntTSL 1 (best)13.72□□□□□ -0.212e-18■■■■□ 21.8
XRN2Q9H0D6 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.021e-7■■■■□ 21.8
XRN2Q9H0D6 CUL7-201ENST00000265348 5254 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.381e-7■■■■□ 21.8
XRN2Q9H0D6 POLR3E-207ENST00000563766 2061 ntTSL 220.03■□□□□ 0.83e-6■■■■□ 21.8
XRN2Q9H0D6 DDAH2-220ENST00000488119 1121 ntTSL 226.08■■□□□ 1.774e-7■■■■□ 21.8
XRN2Q9H0D6 DDAH2-218ENST00000480913 937 ntTSL 522.47■■□□□ 1.194e-7■■■■□ 21.8
XRN2Q9H0D6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.154e-7■■■■□ 21.8
XRN2Q9H0D6 DDAH2-219ENST00000483792 898 ntTSL 514.84□□□□□ -0.034e-7■■■■□ 21.8
XRN2Q9H0D6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.96■□□□□ 0.795e-6■■■■□ 21.8
XRN2Q9H0D6 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC14.75□□□□□ -0.055e-7■■■■□ 21.8
Retrieved 100 of 21,068 protein–RNA pairs in 197.8 ms