Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 NEFHP1-201ENST00000412845 2629 ntBASIC17.67■□□□□ 0.42
TRAF4Q9BUZ4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 AC007322.3-201ENST00000426526 701 ntBASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 AC006058.3-201ENST00000606217 1069 ntBASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRAF4Q9BUZ4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 AC026366.1-201ENST00000488803 879 ntBASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRAF4Q9BUZ4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.64■□□□□ 0.42
TRAF4Q9BUZ4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAF4Q9BUZ4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
TRAF4Q9BUZ4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAF4Q9BUZ4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF4Q9BUZ4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF4Q9BUZ4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF4Q9BUZ4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF4Q9BUZ4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF4Q9BUZ4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF4Q9BUZ4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRAF4Q9BUZ4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF4Q9BUZ4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAF4Q9BUZ4 AC098590.1-201ENST00000468126 897 ntBASIC17.64■□□□□ 0.41
TRAF4Q9BUZ4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAF4Q9BUZ4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRAF4Q9BUZ4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF4Q9BUZ4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF4Q9BUZ4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TRAF4Q9BUZ4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF4Q9BUZ4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF4Q9BUZ4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF4Q9BUZ4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF4Q9BUZ4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF4Q9BUZ4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF4Q9BUZ4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAF4Q9BUZ4 AC128676.1-201ENST00000454392 318 ntBASIC17.63■□□□□ 0.41
TRAF4Q9BUZ4 RPS2P52-201ENST00000469610 820 ntBASIC17.63■□□□□ 0.41
TRAF4Q9BUZ4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.63■□□□□ 0.41
TRAF4Q9BUZ4 AP003097.1-201ENST00000530657 1135 ntBASIC17.63■□□□□ 0.41
TRAF4Q9BUZ4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
TRAF4Q9BUZ4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF4Q9BUZ4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF4Q9BUZ4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAF4Q9BUZ4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF4Q9BUZ4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TRAF4Q9BUZ4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF4Q9BUZ4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF4Q9BUZ4 AC079598.2-202ENST00000546624 1451 ntBASIC17.63■□□□□ 0.41
TRAF4Q9BUZ4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF4Q9BUZ4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAF4Q9BUZ4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF4Q9BUZ4 AC099778.1-201ENST00000568593 1911 ntBASIC17.62■□□□□ 0.41
TRAF4Q9BUZ4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF4Q9BUZ4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAF4Q9BUZ4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAF4Q9BUZ4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms