Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
S1PR3Q99500 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
S1PR3Q99500 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
S1PR3Q99500 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.33■□□□□ 0.2
S1PR3Q99500 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
S1PR3Q99500 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
S1PR3Q99500 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
S1PR3Q99500 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
S1PR3Q99500 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
S1PR3Q99500 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
S1PR3Q99500 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.32■□□□□ 0.2
S1PR3Q99500 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
S1PR3Q99500 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
S1PR3Q99500 KRT8P20-201ENST00000423953 1409 ntBASIC16.32■□□□□ 0.2
S1PR3Q99500 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.32■□□□□ 0.2
S1PR3Q99500 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
S1PR3Q99500 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
S1PR3Q99500 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.32■□□□□ 0.2
S1PR3Q99500 AC105036.2-201ENST00000569468 176 ntBASIC16.32■□□□□ 0.2
S1PR3Q99500 AL031963.3-201ENST00000606441 850 ntBASIC16.32■□□□□ 0.2
S1PR3Q99500 AL691432.2-201ENST00000607222 2038 ntBASIC16.32■□□□□ 0.2
S1PR3Q99500 AL121832.2-201ENST00000610979 668 ntBASIC16.32■□□□□ 0.2
S1PR3Q99500 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
S1PR3Q99500 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
S1PR3Q99500 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
S1PR3Q99500 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
S1PR3Q99500 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
S1PR3Q99500 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
S1PR3Q99500 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
S1PR3Q99500 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
S1PR3Q99500 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.31■□□□□ 0.2
S1PR3Q99500 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
S1PR3Q99500 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
S1PR3Q99500 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
S1PR3Q99500 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.31■□□□□ 0.2
S1PR3Q99500 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
S1PR3Q99500 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.31■□□□□ 0.2
S1PR3Q99500 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
S1PR3Q99500 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.31■□□□□ 0.2
S1PR3Q99500 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.31■□□□□ 0.2
S1PR3Q99500 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
S1PR3Q99500 AC007952.6-201ENST00000573168 2673 ntBASIC16.31■□□□□ 0.2
S1PR3Q99500 AC003957.1-201ENST00000625108 2673 ntBASIC16.31■□□□□ 0.2
S1PR3Q99500 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
S1PR3Q99500 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.31■□□□□ 0.2
S1PR3Q99500 AL355472.2-201ENST00000422958 438 ntBASIC16.31■□□□□ 0.2
S1PR3Q99500 AC093787.1-201ENST00000450396 207 ntBASIC16.31■□□□□ 0.2
S1PR3Q99500 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.31■□□□□ 0.2
S1PR3Q99500 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.31■□□□□ 0.2
S1PR3Q99500 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.31■□□□□ 0.2
S1PR3Q99500 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
S1PR3Q99500 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
S1PR3Q99500 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
S1PR3Q99500 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.31■□□□□ 0.2
S1PR3Q99500 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
S1PR3Q99500 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
S1PR3Q99500 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
S1PR3Q99500 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
S1PR3Q99500 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
S1PR3Q99500 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.31■□□□□ 0.2
S1PR3Q99500 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
S1PR3Q99500 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.3■□□□□ 0.2
S1PR3Q99500 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
S1PR3Q99500 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.3■□□□□ 0.2
S1PR3Q99500 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
S1PR3Q99500 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
S1PR3Q99500 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
S1PR3Q99500 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
S1PR3Q99500 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
S1PR3Q99500 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
S1PR3Q99500 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.3■□□□□ 0.2
S1PR3Q99500 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.3■□□□□ 0.2
S1PR3Q99500 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
S1PR3Q99500 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
S1PR3Q99500 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
S1PR3Q99500 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
S1PR3Q99500 LSM12P1-201ENST00000411836 588 ntBASIC16.3■□□□□ 0.2
S1PR3Q99500 NCF1B-203ENST00000435988 1254 ntBASIC16.3■□□□□ 0.2
S1PR3Q99500 AC083906.2-201ENST00000511578 360 ntBASIC16.3■□□□□ 0.2
S1PR3Q99500 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.3■□□□□ 0.2
S1PR3Q99500 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
S1PR3Q99500 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.3■□□□□ 0.2
S1PR3Q99500 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
S1PR3Q99500 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
S1PR3Q99500 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
S1PR3Q99500 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
S1PR3Q99500 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.3■□□□□ 0.2
S1PR3Q99500 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
S1PR3Q99500 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
S1PR3Q99500 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
S1PR3Q99500 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.29■□□□□ 0.2
S1PR3Q99500 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
S1PR3Q99500 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
S1PR3Q99500 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
S1PR3Q99500 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
S1PR3Q99500 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.29■□□□□ 0.2
S1PR3Q99500 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
S1PR3Q99500 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
S1PR3Q99500 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.29■□□□□ 0.2
S1PR3Q99500 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms