Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.21■□□□□ 0.83
RTP4Q96DX8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTP4Q96DX8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTP4Q96DX8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
RTP4Q96DX8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTP4Q96DX8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.2■□□□□ 0.82
RTP4Q96DX8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTP4Q96DX8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.2■□□□□ 0.82
RTP4Q96DX8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTP4Q96DX8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.2■□□□□ 0.82
RTP4Q96DX8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.2■□□□□ 0.82
RTP4Q96DX8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.2■□□□□ 0.82
RTP4Q96DX8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.2■□□□□ 0.82
RTP4Q96DX8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTP4Q96DX8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.2■□□□□ 0.82
RTP4Q96DX8 AC116351.2-201ENST00000606540 1585 ntBASIC20.2■□□□□ 0.82
RTP4Q96DX8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTP4Q96DX8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTP4Q96DX8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTP4Q96DX8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTP4Q96DX8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.19■□□□□ 0.82
RTP4Q96DX8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.19■□□□□ 0.82
RTP4Q96DX8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RTP4Q96DX8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTP4Q96DX8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RTP4Q96DX8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.19■□□□□ 0.82
RTP4Q96DX8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.19■□□□□ 0.82
RTP4Q96DX8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RTP4Q96DX8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RTP4Q96DX8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RTP4Q96DX8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RTP4Q96DX8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.19■□□□□ 0.82
RTP4Q96DX8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.19■□□□□ 0.82
RTP4Q96DX8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.19■□□□□ 0.82
RTP4Q96DX8 TMEM191A-211ENST00000637163 1067 ntBASIC20.19■□□□□ 0.82
RTP4Q96DX8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.19■□□□□ 0.82
RTP4Q96DX8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
RTP4Q96DX8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTP4Q96DX8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTP4Q96DX8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTP4Q96DX8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTP4Q96DX8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.18■□□□□ 0.82
RTP4Q96DX8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTP4Q96DX8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.18■□□□□ 0.82
RTP4Q96DX8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RTP4Q96DX8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTP4Q96DX8 Z82202.1-201ENST00000623446 1880 ntBASIC20.18■□□□□ 0.82
RTP4Q96DX8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTP4Q96DX8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTP4Q96DX8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.18■□□□□ 0.82
RTP4Q96DX8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.18■□□□□ 0.82
RTP4Q96DX8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTP4Q96DX8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTP4Q96DX8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTP4Q96DX8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
RTP4Q96DX8 AC069152.1-201ENST00000438030 544 ntBASIC20.18■□□□□ 0.82
RTP4Q96DX8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTP4Q96DX8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTP4Q96DX8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RTP4Q96DX8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RTP4Q96DX8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTP4Q96DX8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTP4Q96DX8 AC018553.1-201ENST00000616682 1458 ntBASIC20.18■□□□□ 0.82
RTP4Q96DX8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.18■□□□□ 0.82
RTP4Q96DX8 AC018445.3-201ENST00000624177 1945 ntBASIC20.17■□□□□ 0.82
RTP4Q96DX8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.17■□□□□ 0.82
RTP4Q96DX8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.17■□□□□ 0.82
RTP4Q96DX8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
RTP4Q96DX8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RTP4Q96DX8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.17■□□□□ 0.82
RTP4Q96DX8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTP4Q96DX8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTP4Q96DX8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
RTP4Q96DX8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTP4Q96DX8 MIPEPP3-201ENST00000412105 444 ntBASIC20.17■□□□□ 0.82
RTP4Q96DX8 TSPY20P-201ENST00000450910 630 ntBASIC20.17■□□□□ 0.82
RTP4Q96DX8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.17■□□□□ 0.82
RTP4Q96DX8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.17■□□□□ 0.82
RTP4Q96DX8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.17■□□□□ 0.82
RTP4Q96DX8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.17■□□□□ 0.82
RTP4Q96DX8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTP4Q96DX8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
RTP4Q96DX8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RTP4Q96DX8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RTP4Q96DX8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.17■□□□□ 0.82
RTP4Q96DX8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.17■□□□□ 0.82
RTP4Q96DX8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTP4Q96DX8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTP4Q96DX8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.16■□□□□ 0.82
RTP4Q96DX8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RTP4Q96DX8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.16■□□□□ 0.82
RTP4Q96DX8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTP4Q96DX8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTP4Q96DX8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RTP4Q96DX8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.16■□□□□ 0.82
RTP4Q96DX8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.16■□□□□ 0.82
RTP4Q96DX8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RTP4Q96DX8 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.16■□□□□ 0.82
RTP4Q96DX8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTP4Q96DX8 AC005829.2-201ENST00000571422 1056 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms