Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATPAF2Q8N5M1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATPAF2Q8N5M1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATPAF2Q8N5M1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.31■□□□□ 0.84
ATPAF2Q8N5M1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ATPAF2Q8N5M1 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.31■□□□□ 0.84
ATPAF2Q8N5M1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATPAF2Q8N5M1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.31■□□□□ 0.84
ATPAF2Q8N5M1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.31■□□□□ 0.84
ATPAF2Q8N5M1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ATPAF2Q8N5M1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.31■□□□□ 0.84
ATPAF2Q8N5M1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ATPAF2Q8N5M1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ATPAF2Q8N5M1 TMEM179-206ENST00000616017 1645 ntBASIC20.31■□□□□ 0.84
ATPAF2Q8N5M1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATPAF2Q8N5M1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.31■□□□□ 0.84
ATPAF2Q8N5M1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 AP001271.2-201ENST00000624018 1556 ntBASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.3■□□□□ 0.84
ATPAF2Q8N5M1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.29■□□□□ 0.84
ATPAF2Q8N5M1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.29■□□□□ 0.84
ATPAF2Q8N5M1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
ATPAF2Q8N5M1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATPAF2Q8N5M1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.29■□□□□ 0.84
ATPAF2Q8N5M1 SLC25A24-204ENST00000569674 2357 ntBASIC20.29■□□□□ 0.84
ATPAF2Q8N5M1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATPAF2Q8N5M1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATPAF2Q8N5M1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ATPAF2Q8N5M1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATPAF2Q8N5M1 RPS2P52-201ENST00000469610 820 ntBASIC20.29■□□□□ 0.84
ATPAF2Q8N5M1 UNC93B5-201ENST00000530315 699 ntBASIC20.29■□□□□ 0.84
ATPAF2Q8N5M1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.29■□□□□ 0.84
ATPAF2Q8N5M1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.29■□□□□ 0.84
ATPAF2Q8N5M1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.29■□□□□ 0.84
ATPAF2Q8N5M1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATPAF2Q8N5M1 AC124283.5-201ENST00000624661 1809 ntBASIC20.29■□□□□ 0.84
ATPAF2Q8N5M1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATPAF2Q8N5M1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATPAF2Q8N5M1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATPAF2Q8N5M1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATPAF2Q8N5M1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ATPAF2Q8N5M1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.28■□□□□ 0.84
ATPAF2Q8N5M1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATPAF2Q8N5M1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ATPAF2Q8N5M1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.28■□□□□ 0.84
ATPAF2Q8N5M1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.28■□□□□ 0.84
ATPAF2Q8N5M1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.28■□□□□ 0.84
ATPAF2Q8N5M1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.28■□□□□ 0.84
ATPAF2Q8N5M1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ATPAF2Q8N5M1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.28■□□□□ 0.84
ATPAF2Q8N5M1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.28■□□□□ 0.84
ATPAF2Q8N5M1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ATPAF2Q8N5M1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
ATPAF2Q8N5M1 AFG3L1P-217ENST00000557444 2447 ntBASIC20.28■□□□□ 0.84
ATPAF2Q8N5M1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATPAF2Q8N5M1 AC009237.14-201ENST00000609975 1594 ntBASIC20.28■□□□□ 0.84
ATPAF2Q8N5M1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATPAF2Q8N5M1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.28■□□□□ 0.84
ATPAF2Q8N5M1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATPAF2Q8N5M1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATPAF2Q8N5M1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ATPAF2Q8N5M1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.27■□□□□ 0.84
ATPAF2Q8N5M1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATPAF2Q8N5M1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.27■□□□□ 0.84
ATPAF2Q8N5M1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATPAF2Q8N5M1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ATPAF2Q8N5M1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.27■□□□□ 0.84
ATPAF2Q8N5M1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATPAF2Q8N5M1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATPAF2Q8N5M1 AC116351.2-201ENST00000606540 1585 ntBASIC20.27■□□□□ 0.84
ATPAF2Q8N5M1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATPAF2Q8N5M1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATPAF2Q8N5M1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.27■□□□□ 0.84
ATPAF2Q8N5M1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATPAF2Q8N5M1 UNC93B4-201ENST00000505679 747 ntBASIC20.27■□□□□ 0.84
ATPAF2Q8N5M1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.27■□□□□ 0.84
ATPAF2Q8N5M1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATPAF2Q8N5M1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.27■□□□□ 0.84
ATPAF2Q8N5M1 AC008687.6-201ENST00000596318 630 ntBASIC20.27■□□□□ 0.84
ATPAF2Q8N5M1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ATPAF2Q8N5M1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms