Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS52Q8N1B4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS52Q8N1B4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VPS52Q8N1B4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS52Q8N1B4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.46■■□□□ 1.03
VPS52Q8N1B4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.46■■□□□ 1.03
VPS52Q8N1B4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS52Q8N1B4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
VPS52Q8N1B4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
VPS52Q8N1B4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS52Q8N1B4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS52Q8N1B4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS52Q8N1B4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS52Q8N1B4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
VPS52Q8N1B4 AL355355.2-201ENST00000442321 338 ntBASIC21.44■■□□□ 1.02
VPS52Q8N1B4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
VPS52Q8N1B4 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.44■■□□□ 1.02
VPS52Q8N1B4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
VPS52Q8N1B4 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.44■■□□□ 1.02
VPS52Q8N1B4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.44■■□□□ 1.02
VPS52Q8N1B4 CD177P1-201ENST00000606252 935 ntBASIC21.44■■□□□ 1.02
VPS52Q8N1B4 AC097493.4-201ENST00000641197 219 ntBASIC21.44■■□□□ 1.02
VPS52Q8N1B4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS52Q8N1B4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS52Q8N1B4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS52Q8N1B4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS52Q8N1B4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 AC012306.2-201ENST00000609350 630 ntBASIC21.43■■□□□ 1.02
VPS52Q8N1B4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS52Q8N1B4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
VPS52Q8N1B4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
VPS52Q8N1B4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
VPS52Q8N1B4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VPS52Q8N1B4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
VPS52Q8N1B4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
VPS52Q8N1B4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VPS52Q8N1B4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.42■■□□□ 1.02
VPS52Q8N1B4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
VPS52Q8N1B4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VPS52Q8N1B4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VPS52Q8N1B4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VPS52Q8N1B4 AL353807.1-201ENST00000427475 662 ntBASIC21.42■■□□□ 1.02
VPS52Q8N1B4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.42■■□□□ 1.02
VPS52Q8N1B4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.42■■□□□ 1.02
VPS52Q8N1B4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms