Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 AC083880.1-201ENST00000608266 535 ntBASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NHLRC1Q6VVB1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NHLRC1Q6VVB1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NHLRC1Q6VVB1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
NHLRC1Q6VVB1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NHLRC1Q6VVB1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NHLRC1Q6VVB1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NHLRC1Q6VVB1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NHLRC1Q6VVB1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 TMEM179-206ENST00000616017 1645 ntBASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NHLRC1Q6VVB1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 HLA-G-202ENST00000376815 851 ntBASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 HLA-G-203ENST00000376818 1127 ntBASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 AC069152.1-201ENST00000438030 544 ntBASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 AC097658.1-201ENST00000475555 843 ntBASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 AC005829.2-201ENST00000571422 1056 ntBASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NHLRC1Q6VVB1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 KRT16P6-202ENST00000425692 1426 ntBASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NHLRC1Q6VVB1 AC009237.14-201ENST00000609975 1594 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms