Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
KRT40Q6A162 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
KRT40Q6A162 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.93■■□□□ 1.26
KRT40Q6A162 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.93■■□□□ 1.26
KRT40Q6A162 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.93■■□□□ 1.26
KRT40Q6A162 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.93■■□□□ 1.26
KRT40Q6A162 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
KRT40Q6A162 UNC93B4-201ENST00000505679 747 ntBASIC22.93■■□□□ 1.26
KRT40Q6A162 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.93■■□□□ 1.26
KRT40Q6A162 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
KRT40Q6A162 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
KRT40Q6A162 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
KRT40Q6A162 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
KRT40Q6A162 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
KRT40Q6A162 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.93■■□□□ 1.26
KRT40Q6A162 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
KRT40Q6A162 AL158211.5-201ENST00000623583 2518 ntBASIC22.92■■□□□ 1.26
KRT40Q6A162 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.92■■□□□ 1.26
KRT40Q6A162 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.92■■□□□ 1.26
KRT40Q6A162 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
KRT40Q6A162 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
KRT40Q6A162 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
KRT40Q6A162 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC22.92■■□□□ 1.26
KRT40Q6A162 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
KRT40Q6A162 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
KRT40Q6A162 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.92■■□□□ 1.26
KRT40Q6A162 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
KRT40Q6A162 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.92■■□□□ 1.26
KRT40Q6A162 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
KRT40Q6A162 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.92■■□□□ 1.26
KRT40Q6A162 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.92■■□□□ 1.26
KRT40Q6A162 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.92■■□□□ 1.26
KRT40Q6A162 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
KRT40Q6A162 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
KRT40Q6A162 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
KRT40Q6A162 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
KRT40Q6A162 AC009237.14-201ENST00000609975 1594 ntBASIC22.92■■□□□ 1.26
KRT40Q6A162 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
KRT40Q6A162 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.92■■□□□ 1.26
KRT40Q6A162 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.92■■□□□ 1.26
KRT40Q6A162 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
KRT40Q6A162 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
KRT40Q6A162 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
KRT40Q6A162 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
KRT40Q6A162 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC22.91■■□□□ 1.26
KRT40Q6A162 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
KRT40Q6A162 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
KRT40Q6A162 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
KRT40Q6A162 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
KRT40Q6A162 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.91■■□□□ 1.26
KRT40Q6A162 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.91■■□□□ 1.26
KRT40Q6A162 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.91■■□□□ 1.26
KRT40Q6A162 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
KRT40Q6A162 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.91■■□□□ 1.26
KRT40Q6A162 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
KRT40Q6A162 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
KRT40Q6A162 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.91■■□□□ 1.26
KRT40Q6A162 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
KRT40Q6A162 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
KRT40Q6A162 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
KRT40Q6A162 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
KRT40Q6A162 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.9■■□□□ 1.26
KRT40Q6A162 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
KRT40Q6A162 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
KRT40Q6A162 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
KRT40Q6A162 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
KRT40Q6A162 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
KRT40Q6A162 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.9■■□□□ 1.26
KRT40Q6A162 AC097658.1-201ENST00000475555 843 ntBASIC22.9■■□□□ 1.26
KRT40Q6A162 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.9■■□□□ 1.26
KRT40Q6A162 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.9■■□□□ 1.26
KRT40Q6A162 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
KRT40Q6A162 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
KRT40Q6A162 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
KRT40Q6A162 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
KRT40Q6A162 PHGDH-210ENST00000641115 1638 ntBASIC22.9■■□□□ 1.26
KRT40Q6A162 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC22.89■■□□□ 1.26
KRT40Q6A162 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
KRT40Q6A162 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
KRT40Q6A162 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
KRT40Q6A162 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.89■■□□□ 1.25
KRT40Q6A162 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
KRT40Q6A162 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.89■■□□□ 1.25
KRT40Q6A162 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.89■■□□□ 1.25
KRT40Q6A162 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.89■■□□□ 1.25
KRT40Q6A162 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.89■■□□□ 1.25
KRT40Q6A162 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
KRT40Q6A162 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.89■■□□□ 1.25
KRT40Q6A162 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
KRT40Q6A162 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
KRT40Q6A162 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.89■■□□□ 1.25
KRT40Q6A162 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.89■■□□□ 1.25
KRT40Q6A162 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
KRT40Q6A162 AC005829.2-201ENST00000571422 1056 ntBASIC22.89■■□□□ 1.25
KRT40Q6A162 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
KRT40Q6A162 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
KRT40Q6A162 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
KRT40Q6A162 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
KRT40Q6A162 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.88■■□□□ 1.25
KRT40Q6A162 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms