Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNFT1Q5M7Z0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RNFT1Q5M7Z0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNFT1Q5M7Z0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNFT1Q5M7Z0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 AP000525.1-201ENST00000608286 694 ntBASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RNFT1Q5M7Z0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNFT1Q5M7Z0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNFT1Q5M7Z0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNFT1Q5M7Z0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNFT1Q5M7Z0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.86■□□□□ 0.45
RNFT1Q5M7Z0 MIR1224-201ENST00000408193 85 ntBASIC17.86■□□□□ 0.45
RNFT1Q5M7Z0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.86■□□□□ 0.45
RNFT1Q5M7Z0 C1QL1P1-201ENST00000568105 661 ntBASIC17.86■□□□□ 0.45
RNFT1Q5M7Z0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
RNFT1Q5M7Z0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNFT1Q5M7Z0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.86■□□□□ 0.45
RNFT1Q5M7Z0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNFT1Q5M7Z0 KRT16P1-201ENST00000399124 1418 ntBASIC17.86■□□□□ 0.45
RNFT1Q5M7Z0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RNFT1Q5M7Z0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.86■□□□□ 0.45
RNFT1Q5M7Z0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNFT1Q5M7Z0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RNFT1Q5M7Z0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNFT1Q5M7Z0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.86■□□□□ 0.45
RNFT1Q5M7Z0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RNFT1Q5M7Z0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNFT1Q5M7Z0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNFT1Q5M7Z0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNFT1Q5M7Z0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNFT1Q5M7Z0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNFT1Q5M7Z0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNFT1Q5M7Z0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNFT1Q5M7Z0 RCN1P1-201ENST00000400413 996 ntBASIC17.85■□□□□ 0.45
RNFT1Q5M7Z0 CLDN5-201ENST00000403084 2357 ntBASIC17.85■□□□□ 0.45
RNFT1Q5M7Z0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNFT1Q5M7Z0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.85■□□□□ 0.45
RNFT1Q5M7Z0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.85■□□□□ 0.45
RNFT1Q5M7Z0 AC116562.2-201ENST00000507042 360 ntBASIC17.85■□□□□ 0.45
RNFT1Q5M7Z0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.85■□□□□ 0.45
RNFT1Q5M7Z0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.85■□□□□ 0.45
RNFT1Q5M7Z0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNFT1Q5M7Z0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 UNC93B2-201ENST00000285383 730 ntBASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 AL390955.1-201ENST00000428694 934 ntBASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RNFT1Q5M7Z0 AL137060.1-201ENST00000618151 2648 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms