Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SGO1Q5FBB7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.23■□□□□ 0.67
SGO1Q5FBB7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SGO1Q5FBB7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SGO1Q5FBB7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SGO1Q5FBB7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SGO1Q5FBB7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SGO1Q5FBB7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SGO1Q5FBB7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SGO1Q5FBB7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SGO1Q5FBB7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.22■□□□□ 0.67
SGO1Q5FBB7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SGO1Q5FBB7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SGO1Q5FBB7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SGO1Q5FBB7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.22■□□□□ 0.67
SGO1Q5FBB7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.22■□□□□ 0.67
SGO1Q5FBB7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SGO1Q5FBB7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.22■□□□□ 0.67
SGO1Q5FBB7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.22■□□□□ 0.67
SGO1Q5FBB7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.22■□□□□ 0.67
SGO1Q5FBB7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SGO1Q5FBB7 AL031963.3-201ENST00000606441 850 ntBASIC19.22■□□□□ 0.67
SGO1Q5FBB7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SGO1Q5FBB7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SGO1Q5FBB7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SGO1Q5FBB7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SGO1Q5FBB7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 AC116562.4-201ENST00000641316 2276 ntBASIC19.21■□□□□ 0.67
SGO1Q5FBB7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 LSM12P1-201ENST00000411836 588 ntBASIC19.21■□□□□ 0.67
SGO1Q5FBB7 KRT8P20-201ENST00000423953 1409 ntBASIC19.21■□□□□ 0.67
SGO1Q5FBB7 KRT16P6-202ENST00000425692 1426 ntBASIC19.21■□□□□ 0.67
SGO1Q5FBB7 CDCA4P2-201ENST00000441182 718 ntBASIC19.21■□□□□ 0.67
SGO1Q5FBB7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 C2orf69P4-201ENST00000565394 541 ntBASIC19.21■□□□□ 0.67
SGO1Q5FBB7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.21■□□□□ 0.67
SGO1Q5FBB7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.21■□□□□ 0.67
SGO1Q5FBB7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SGO1Q5FBB7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SGO1Q5FBB7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SGO1Q5FBB7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SGO1Q5FBB7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SGO1Q5FBB7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SGO1Q5FBB7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
SGO1Q5FBB7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SGO1Q5FBB7 AC105036.2-201ENST00000569468 176 ntBASIC19.2■□□□□ 0.66
SGO1Q5FBB7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SGO1Q5FBB7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.2■□□□□ 0.66
SGO1Q5FBB7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
SGO1Q5FBB7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SGO1Q5FBB7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SGO1Q5FBB7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SGO1Q5FBB7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SGO1Q5FBB7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SGO1Q5FBB7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SGO1Q5FBB7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SGO1Q5FBB7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SGO1Q5FBB7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.19■□□□□ 0.66
SGO1Q5FBB7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.19■□□□□ 0.66
SGO1Q5FBB7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SGO1Q5FBB7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SGO1Q5FBB7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SGO1Q5FBB7 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.19■□□□□ 0.66
SGO1Q5FBB7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
SGO1Q5FBB7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.19■□□□□ 0.66
SGO1Q5FBB7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.19■□□□□ 0.66
SGO1Q5FBB7 AL512625.2-201ENST00000417533 625 ntBASIC19.19■□□□□ 0.66
SGO1Q5FBB7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.19■□□□□ 0.66
SGO1Q5FBB7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.19■□□□□ 0.66
SGO1Q5FBB7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.19■□□□□ 0.66
SGO1Q5FBB7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.19■□□□□ 0.66
SGO1Q5FBB7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SGO1Q5FBB7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.19■□□□□ 0.66
SGO1Q5FBB7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.19■□□□□ 0.66
SGO1Q5FBB7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.19■□□□□ 0.66
SGO1Q5FBB7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SGO1Q5FBB7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.18■□□□□ 0.66
SGO1Q5FBB7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SGO1Q5FBB7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SGO1Q5FBB7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SGO1Q5FBB7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms