Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLRN1P58418 AL390719.1-204ENST00000412397 1219 ntBASIC17.69■□□□□ 0.42
CLRN1P58418 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.69■□□□□ 0.42
CLRN1P58418 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLRN1P58418 GUSBP6-202ENST00000438529 1198 ntBASIC17.69■□□□□ 0.42
CLRN1P58418 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLRN1P58418 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.69■□□□□ 0.42
CLRN1P58418 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.69■□□□□ 0.42
CLRN1P58418 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.69■□□□□ 0.42
CLRN1P58418 AL109923.1-201ENST00000618799 583 ntBASIC17.69■□□□□ 0.42
CLRN1P58418 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLRN1P58418 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLRN1P58418 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLRN1P58418 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLRN1P58418 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.69■□□□□ 0.42
CLRN1P58418 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLRN1P58418 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.69■□□□□ 0.42
CLRN1P58418 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.69■□□□□ 0.42
CLRN1P58418 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLRN1P58418 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
CLRN1P58418 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLRN1P58418 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLRN1P58418 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLRN1P58418 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CLRN1P58418 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CLRN1P58418 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLRN1P58418 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.68■□□□□ 0.42
CLRN1P58418 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLRN1P58418 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLRN1P58418 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CLRN1P58418 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CLRN1P58418 AC091874.3-201ENST00000512672 1195 ntBASIC17.68■□□□□ 0.42
CLRN1P58418 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.68■□□□□ 0.42
CLRN1P58418 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLRN1P58418 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CLRN1P58418 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLRN1P58418 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLRN1P58418 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.68■□□□□ 0.42
CLRN1P58418 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.68■□□□□ 0.42
CLRN1P58418 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CLRN1P58418 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLRN1P58418 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.67■□□□□ 0.42
CLRN1P58418 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLRN1P58418 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLRN1P58418 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLRN1P58418 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLRN1P58418 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CLRN1P58418 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.67■□□□□ 0.42
CLRN1P58418 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.67■□□□□ 0.42
CLRN1P58418 AC097658.1-201ENST00000475555 843 ntBASIC17.67■□□□□ 0.42
CLRN1P58418 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.67■□□□□ 0.42
CLRN1P58418 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.67■□□□□ 0.42
CLRN1P58418 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLRN1P58418 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLRN1P58418 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLRN1P58418 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLRN1P58418 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLRN1P58418 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.67■□□□□ 0.42
CLRN1P58418 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.67■□□□□ 0.42
CLRN1P58418 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.67■□□□□ 0.42
CLRN1P58418 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLRN1P58418 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLRN1P58418 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLRN1P58418 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.67■□□□□ 0.42
CLRN1P58418 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLRN1P58418 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLRN1P58418 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLRN1P58418 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLRN1P58418 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.66■□□□□ 0.42
CLRN1P58418 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLRN1P58418 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLRN1P58418 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLRN1P58418 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.66■□□□□ 0.42
CLRN1P58418 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.66■□□□□ 0.42
CLRN1P58418 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.66■□□□□ 0.42
CLRN1P58418 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLRN1P58418 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLRN1P58418 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.66■□□□□ 0.42
CLRN1P58418 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLRN1P58418 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.66■□□□□ 0.42
CLRN1P58418 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLRN1P58418 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLRN1P58418 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLRN1P58418 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.66■□□□□ 0.42
CLRN1P58418 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLRN1P58418 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLRN1P58418 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CLRN1P58418 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLRN1P58418 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLRN1P58418 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
CLRN1P58418 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.65■□□□□ 0.42
CLRN1P58418 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.65■□□□□ 0.42
CLRN1P58418 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLRN1P58418 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLRN1P58418 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.65■□□□□ 0.42
CLRN1P58418 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.65■□□□□ 0.42
CLRN1P58418 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLRN1P58418 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLRN1P58418 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.65■□□□□ 0.42
CLRN1P58418 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms