Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 GUSBP6-202ENST00000438529 1198 ntBASIC18.19■□□□□ 0.5
SLC1A3P43003 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.19■□□□□ 0.5
SLC1A3P43003 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.19■□□□□ 0.5
SLC1A3P43003 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A3P43003 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC1A3P43003 AL691432.2-201ENST00000607222 2038 ntBASIC18.19■□□□□ 0.5
SLC1A3P43003 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SLC1A3P43003 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SLC1A3P43003 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SLC1A3P43003 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC1A3P43003 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SLC1A3P43003 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A3P43003 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A3P43003 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A3P43003 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A3P43003 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A3P43003 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SLC1A3P43003 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.18■□□□□ 0.5
SLC1A3P43003 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A3P43003 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A3P43003 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A3P43003 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A3P43003 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC1A3P43003 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A3P43003 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A3P43003 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SLC1A3P43003 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC1A3P43003 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A3P43003 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC1A3P43003 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A3P43003 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC1A3P43003 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC1A3P43003 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC1A3P43003 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A3P43003 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SLC1A3P43003 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A3P43003 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
SLC1A3P43003 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A3P43003 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A3P43003 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A3P43003 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SLC1A3P43003 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A3P43003 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A3P43003 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A3P43003 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC1A3P43003 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SLC1A3P43003 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A3P43003 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC1A3P43003 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A3P43003 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC1A3P43003 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SLC1A3P43003 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A3P43003 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A3P43003 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SLC1A3P43003 MIR4758-201ENST00000577688 71 ntBASIC18.17■□□□□ 0.5
SLC1A3P43003 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC1A3P43003 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC1A3P43003 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.17■□□□□ 0.5
SLC1A3P43003 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC1A3P43003 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A3P43003 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC1A3P43003 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A3P43003 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A3P43003 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A3P43003 AC098818.2-201ENST00000564925 2320 ntBASIC18.17■□□□□ 0.5
SLC1A3P43003 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A3P43003 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A3P43003 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A3P43003 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A3P43003 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A3P43003 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A3P43003 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC1A3P43003 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A3P43003 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC1A3P43003 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A3P43003 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A3P43003 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A3P43003 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A3P43003 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC1A3P43003 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A3P43003 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A3P43003 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A3P43003 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC1A3P43003 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A3P43003 DUSP5P2-201ENST00000426873 1033 ntBASIC18.16■□□□□ 0.5
SLC1A3P43003 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC1A3P43003 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.16■□□□□ 0.5
SLC1A3P43003 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC1A3P43003 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A3P43003 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC1A3P43003 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A3P43003 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A3P43003 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A3P43003 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A3P43003 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC1A3P43003 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC1A3P43003 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A3P43003 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A3P43003 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A3P43003 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms